RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 RAB35Q15286 201 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 TRIP10Q15642 601 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 CDKN3Q16667 212 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 RABL6Q3YEC7 729 aaPredicted RBP2.32□□□□□ -2.04
OTUD4-207ENST00000509517 GLYR1Q49A26 553 aaPredicted RBP2.32□□□□□ -2.04
OTUD4-207ENST00000509517 BEND6Q5SZJ8 279 aaPredicted RBP2.32□□□□□ -2.04
OTUD4-207ENST00000509517 MEDAGQ5VYS4 303 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 NIPAL3Q6P499 406 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 HACD2Q6Y1H2 254 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 P4HA3Q7Z4N8 544 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 PARGQ86W56 976 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 CBWD2Q8IUF1 395 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 MISPQ8IVT2 679 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 ZNF679Q8IYX0 411 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 PRR22Q8IZ63 422 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 STEAP2Q8NFT2 490 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 OR8J1Q8NGP2 316 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 OR10T2Q8NGX3 314 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 ZNF564Q8TBZ8 553 aaPredicted RBP2.32□□□□□ -2.04
OTUD4-207ENST00000509517 PHYHIPLQ96FC7 376 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 DPH7Q9BTV6 452 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 C19orf24Q9BVV8 132 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 ERVK-6Q9BXR3 956 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 GON7Q9BXV9 100 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 RIBC2Q9H4K1 309 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 DUS2Q9NX74 493 aaKnown RBP2.32□□□□□ -2.04
OTUD4-207ENST00000509517 ELOVL2Q9NXB9 296 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 TMEM9Q9P0T7 183 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 NYAP2Q9P242 653 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 BCAP29Q9UHQ4 241 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 KLHL21Q9UJP4 597 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 HPCAL4Q9UM19 191 aa2.32□□□□□ -2.04
OTUD4-207ENST00000509517 SF3B1O75533 1304 aaKnown RBP eCLIP2.32□□□□□ -2.04
OTUD4-207ENST00000509517 IGLV8-61A0A075B6I0 122 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 ZFP92A6NM28 416 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 LGALS8O00214 317 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 CDX4O14627 284 aaPredicted RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 TM9SF1O15321 606 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 LATO43561 262 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 RAMP1O60894 148 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 OPN1MWP04001 364 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 SLC35G4P0C7Q5 338 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 OPN1MW2P0DN77 364 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 OPN1MW3P0DN78 364 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 CALCBP10092 127 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 RALAP11233 206 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 RPS2P15880 293 aaKnown RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 HNF1AP20823 631 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 ZP3P21754 424 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 PCMT1P22061 227 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 UQCRC2P22695 453 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 PTBP1P26599 531 aaKnown RBP eCLIP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 TDO2P48775 406 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 RPS6P62753 249 aaKnown RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 MRPS6P82932 125 aaKnown RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 LRRC74AQ0VAA2 488 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 CAMK4Q16566 473 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 SLC36A3Q495N2 470 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 CFAP221Q4G0U5 840 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 RABGAP1LQ5R372 815 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 SPATA46Q5T0L3 261 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 DMKNQ6E0U4 476 aaPredicted RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 UFSP1Q6NVU6 142 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 ZNF562Q6V9R5 426 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 ZYG11AQ6WRX3 759 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 NET1Q7Z628 596 aaPredicted RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 C9orf40Q8IXQ3 194 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 MCOLN2Q8IZK6 566 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 CENPLQ8N0S6 344 aaPredicted RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 NANPQ8TBE9 248 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 RNF139Q8WU17 664 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 RPL3LQ92901 407 aaKnown RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 FAM122AQ96E09 287 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 NUS1Q96E22 293 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 CYYR1Q96J86 154 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 TTC25Q96NG3 672 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 SECISBP2Q96T21 854 aaKnown RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 GPA33Q99795 319 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 WRAP53Q9BUR4 548 aaKnown RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 FICDQ9BVA6 458 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 GPN2Q9H9Y4 310 aaPredicted RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 PDFQ9HBH1 243 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 RAB18Q9NP72 206 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 KLRF1Q9NZS2 232 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 APOBEC3BQ9UH17 382 aaKnown RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 CA5BQ9Y2D0 317 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 EXOSC1Q9Y3B2 195 aaKnown RBP2.31□□□□□ -2.04
OTUD4-207ENST00000509517 FLVCR1Q9Y5Y0 555 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 METP08581 1390 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 KDM6BO15054 1643 aa2.31□□□□□ -2.04
OTUD4-207ENST00000509517 TTC26A0AVF1 554 aa2.3□□□□□ -2.04
OTUD4-207ENST00000509517 K7EQM0 130 aa2.3□□□□□ -2.04
OTUD4-207ENST00000509517 ALOX15BO15296 676 aa2.3□□□□□ -2.04
OTUD4-207ENST00000509517 CTAGE5O15320 804 aa2.3□□□□□ -2.04
OTUD4-207ENST00000509517 TBX19O60806 448 aa2.3□□□□□ -2.04
OTUD4-207ENST00000509517 SURF6O75683 361 aaKnown RBP2.3□□□□□ -2.04
OTUD4-207ENST00000509517 SERF1AO75920 110 aa2.3□□□□□ -2.04
OTUD4-207ENST00000509517 NOL4O94818 638 aa2.3□□□□□ -2.04
OTUD4-207ENST00000509517 IGFBP1P08833 259 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms