RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 ZNF324BQ6AW86 544 aaPredicted RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 H3F3CQ6NXT2 135 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 RPUSD3Q6P087 351 aaKnown RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 METTL2BQ6P1Q9 378 aaKnown RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 EMBQ6PCB8 327 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 SLC22A25Q6T423 547 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 C9orf47Q6ZRZ4 202 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 Q6ZSV7 163 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 LANCL3Q6ZV70 420 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 MOB3CQ70IA8 216 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 CPEB2Q7Z5Q1 589 aaKnown RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ANKRD37Q7Z713 158 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ADAMTSL2Q86TH1 951 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 LCA5Q86VQ0 697 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 THOC6Q86W42 341 aaKnown RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 C17orf64Q86WR6 236 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 CENPLQ8N0S6 344 aaPredicted RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 TCAIMQ8N3R3 496 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 SPATA6LQ8N4H0 392 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 MREGQ8N565 214 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ST6GALNAC3Q8NDV1 305 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ZNF740Q8NDX6 193 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 PLPP5Q8NEB5 264 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 OR5T3Q8NGG3 340 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ZCCHC10Q8TBK6 192 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 STAG3L4Q8TBR4 150 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 NT5CQ8TCD5 201 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ACMSDQ8TDX5 336 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 GRHL3Q8TE85 626 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 CREB3L4Q8TEY5 395 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 AENQ8WTP8 325 aaKnown RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 SLC5A11Q8WWX8 675 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 METTL21AQ8WXB1 218 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 HAS2Q92819 552 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 NEIL2Q969S2 332 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 NXNL1Q96CM4 212 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 MTBPQ96DY7 904 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 WDR34Q96EX3 536 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 SMIM10Q96HG1 83 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 TSNARE1Q96NA8 513 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 OR1F2PQ96R84 312 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 TAAR6Q96RI8 345 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ATOH8Q96SQ7 321 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 PAFAH2Q99487 392 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 SLX1AQ9BQ83 275 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 TMEM109Q9BVC6 243 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 SF3B5Q9BWJ5 86 aaKnown RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 CAPS2Q9BXY5 557 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 PARD6BQ9BYG5 372 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ROPN1BQ9BZX4 212 aaPredicted RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 VN1R1Q9GZP7 353 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 KLHL31Q9H511 634 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 NT5DC2Q9H857 520 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ROPN1Q9HAT0 212 aaPredicted RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 PELI2Q9HAT8 420 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ANKHQ9HCJ1 492 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 AGPAT4Q9NRZ5 378 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 PSD3Q9NYI0 1048 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 STMN3Q9NZ72 180 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 HCN3Q9P1Z3 774 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 TXNDC16Q9P2K2 825 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 COPG2Q9UBF2 871 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 CTNNAL1Q9UBT7 734 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 DCDC2Q9UHG0 476 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 ERRFI1Q9UJM3 462 aaPredicted RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 SLC22A14Q9Y267 594 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 NAALAD2Q9Y3Q0 740 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 OARD1Q9Y530 152 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 MYO18BQ8IUG5 2567 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 NUP214P35658 2090 aaPredicted RBP3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 COL12A1Q99715 3063 aa3.23□□□□□ -1.89
UBE2D3-226ENST00000508635 TRAV17A0A0B4J275 112 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 EXOC1LA0A1B0GW35 172 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 A0A1W2PPM1 405 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 DYTNA2CJ06 578 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 LRIT2A6NDA9 550 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 OR5H15A6NDH6 313 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 PABPN1LA6NDY0 278 aaKnown RBP3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 ZNF860A6NHJ4 632 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 SYCE1LA8MT33 242 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 A8MUI8 341 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 MAGEB17A8MXT2 336 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 TRIM49D1C9J1S8 452 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 NDUFS4O43181 175 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 LRRTM2O43300 516 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 CHST10O43529 356 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 RGS14O43566 566 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 B4GALT2O60909 372 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 KERAO60938 352 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 STK16O75716 305 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 CDC123O75794 336 aaPredicted RBP3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 CLDN1O95832 211 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 F10P00742 488 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 LCATP04180 440 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 SERPIND1P05546 499 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 FHP07954 510 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 CHRM4P08173 479 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 GSTA1P08263 222 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 INHBAP08476 426 aa3.22□□□□□ -1.89
UBE2D3-226ENST00000508635 RBP1P09455 135 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms