RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 DLEU7Q6UYE1 221 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 FRRS1Q6ZNA5 592 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 YRDCQ86U90 279 aaKnown RBP13.63□□□□□ -0.23
RNF4-210ENST00000508235 CD163Q86VB7 1156 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 DOLPP1Q86YN1 238 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 PM20D2Q8IYS1 436 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 METTL25Q8N6Q8 603 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 PCYOX1LQ8NBM8 494 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 CLEC18CQ8NCF0 446 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 ABTB1Q969K4 478 aaPredicted RBP13.63□□□□□ -0.23
RNF4-210ENST00000508235 MTHFD2LQ9H903 347 aaPredicted RBP13.63□□□□□ -0.23
RNF4-210ENST00000508235 SLAMF8Q9P0V8 285 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 SH3BGRL2Q9UJC5 107 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 TINAGQ9UJW2 476 aa13.63□□□□□ -0.23
RNF4-210ENST00000508235 SERINC4A6NH21 518 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 E9PLN8 166 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 ZNF264O43296 627 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 EIF4E2O60573 245 aaKnown RBP13.62□□□□□ -0.23
RNF4-210ENST00000508235 WDR1O75083 606 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 UGT2B17O75795 530 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 C1QCP02747 245 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 BCHEP06276 602 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 TFPTP0C1Z6 253 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 UBL4AP11441 157 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 HK1P19367 917 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 CHMP24386 653 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 PTGER4P35408 488 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 P2RX1P51575 399 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 CRYZQ08257 329 aaKnown RBP13.62□□□□□ -0.23
RNF4-210ENST00000508235 CD226Q15762 336 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 TRMT5Q32P41 509 aaKnown RBP13.62□□□□□ -0.23
RNF4-210ENST00000508235 PRAMEF8Q5VWM4 474 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 PRAMEF7Q5VXH5 474 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 VASNQ6EMK4 673 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 TMEM211Q6ICI0 200 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 RETREG3Q86VR2 466 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 FJX1Q86VR8 437 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 MSRB3Q8IXL7 192 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 CMIPQ8IY22 773 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 PEX5LQ8IYB4 626 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 ANKFN1Q8N957 763 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 TOR1AIP2Q8NFQ8 470 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 RP9Q8TA86 221 aaKnown RBP13.62□□□□□ -0.23
RNF4-210ENST00000508235 ZBTB8AQ96BR9 441 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 SFXN2Q96NB2 322 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 ANKRD27Q96NW4 1050 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 CGREF1Q99674 301 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 SH3GL1Q99961 368 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 VKORC1Q9BQB6 163 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 PIGQQ9BRB3 760 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 A4GALTQ9NPC4 353 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.62□□□□□ -0.23
RNF4-210ENST00000508235 FAM53CQ9NYF3 392 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 SPRR3Q9UBC9 169 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 STOML1Q9UBI4 398 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 SLC35A3Q9Y2D2 325 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 MEMO1Q9Y316 297 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 SLC6A5Q9Y345 797 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 HRH3Q9Y5N1 445 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 POLEQ07864 2286 aa13.62□□□□□ -0.23
RNF4-210ENST00000508235 PCNX3Q9H6A9 2034 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 A0A0G2JPF8 293 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 PRAMEF27A3QJZ7 478 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 AGAP5A6NIR3 686 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 AHRRA9YTQ3 701 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 HNRNPCL2B2RXH8 293 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 HNRNPCL3B7ZW38 293 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 C5orf58C9J3I9 102 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 FBP2O00757 339 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 MRASO14807 208 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 ZIC3O60481 467 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 HNRNPCL1O60812 293 aaKnown RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 SEMA7AO75326 666 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 TNFRSF21O75509 655 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 ZIC2O95409 532 aaPredicted RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 CSTAP01040 98 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 DBIP07108 87 aaKnown RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 CHRM4P08173 479 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 HNRNPCL4P0DMR1 293 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 CD1EP15812 388 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 BMP7P18075 431 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 GFRA1P56159 465 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 CHRNEQ04844 493 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 FGFBP1Q14512 234 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 RUNDC3AQ59EK9 446 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 GCNT6Q5T4J0 391 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 RAET1LQ5VY80 246 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 ZNF585AQ6P3V2 769 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 EIF3MQ7L2H7 374 aaKnown RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 MTDHQ86UE4 582 aaKnown RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 SNX32Q86XE0 403 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 SSC4DQ8WTU2 575 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 PHF10Q8WUB8 498 aaKnown RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 SLC38A5Q8WUX1 472 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 SH3YL1Q96HL8 342 aaPredicted RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 TIMP4Q99727 224 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 CPPED1Q9BRF8 314 aaPredicted RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 THUMPD3Q9BV44 507 aaKnown RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 UGT2B28Q9BY64 529 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 SLC38A1Q9H2H9 487 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms