RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	C16orf62	Q7Z3J2	963 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	C9orf106	Q8NAJ2	232 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	ZNF527	Q8NB42	609 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	XAGE5	Q8WWM1	108 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	RAB8B	Q92930	207 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	CCDC115	Q96NT0	180 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	PANX1	Q96RD7	426 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	SDF2	Q99470	211 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	PIGQ	Q9BRB3	760 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	SLC35A5	Q9BS91	424 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	INPP5K	Q9BT40	448 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	BTNL2	Q9UIR0	455 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MAST4	O15021	2626 aa		12.79	□□□□□ -0.36
CCHCR1-222	ENST00000507459		A0A1W2PQD3	144 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MBD3L3	A6NE82	208 aa	Predicted RBP	12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	CCDC154	A6NI56	674 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459		H0YC42	278 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459		H3BNH8	94 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	GTPBP1	O00178	669 aa	Known RBP	12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	C1QC	P02747	245 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	CDKN2C	P42773	168 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	ZNF41	P51814	821 aa	Predicted RBP	12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	ZNF136	P52737	540 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	SUCLG1	P53597	346 aa	Known RBP	12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	TPD52	P55327	224 aa	Predicted RBP	12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	BCL2A1	Q16548	175 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	GLYR1	Q49A26	553 aa	Predicted RBP	12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	SAXO2	Q658L1	398 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	EPGN	Q6UW88	154 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	GRAMD2A	Q8IUY3	354 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MISP	Q8IVT2	679 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MEIOB	Q8N635	442 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	GLB1L3	Q8NCI6	653 aa	Predicted RBP	12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	B4GALNT2	Q8NHY0	566 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	SPOCK3	Q9BQ16	436 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	KLHDC3	Q9BQ90	382 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	ENKD1	Q9H0I2	346 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	HHATL	Q9HCP6	504 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	EXD2	Q9NVH0	621 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MKLN1	Q9UL63	735 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	ADGRG4	Q8IZF6	3080 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	HCFC1	P51610	2035 aa		12.78	□□□□□ -0.36
CCHCR1-222	ENST00000507459	LINC01387	J3KSC0	135 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	POLR3G	O15318	223 aa	Predicted RBP	12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	OIP5	O43482	229 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	FCMR	O60667	390 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	STX11	O75558	287 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	NUDT14	O95848	222 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	AK1	P00568	194 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	OPN1LW	P04000	364 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	IL6	P05231	212 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CTSS	P25774	331 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	KHK	P50053	298 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CLDN20	P56880	219 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ZNF117	Q03924	483 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	SNTB1	Q13884	538 aa	Known RBP	12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	GSTA3	Q16772	222 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	NDUFAF6	Q330K2	333 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ARHGAP11B	Q3KRB8	267 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	KLHL26	Q53HC5	615 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ATAD3B	Q5T9A4	648 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	P4HA3	Q7Z4N8	544 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	GDF7	Q7Z4P5	450 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	RNF130	Q86XS8	419 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TRIML2	Q8N7C3	387 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	RELL2	Q8NC24	303 aa	Predicted RBP	12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CHDH	Q8NE62	594 aa	Predicted RBP	12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	OR9I1	Q8NGQ6	314 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	GOT1L1	Q8NHS2	421 aa	Predicted RBP	12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	RFWD2	Q8NHY2	731 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	MIPOL1	Q8TD10	442 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	INTS12	Q96CB8	462 aa	Known RBP	12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	NEURL3	Q96EH8	262 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	NPAS1	Q99742	590 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TM9SF2	Q99805	663 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	EBF4	Q9BQW3	602 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TCF7L2	Q9NQB0	619 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	MED17	Q9NVC6	651 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ZIM2	Q9NZV7	527 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CARD8	Q9Y2G2	431 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	DTNA	Q9Y4J8	743 aa		12.77	□□□□□ -0.37
CCHCR1-222	ENST00000507459	DOCK7	Q96N67	2140 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459		A0A087WZY1	265 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	NPIPB9	F8W1W9	429 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	RFXANK	O14593	260 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TNFRSF21	O75509	655 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TGDS	O95455	350 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TGM6	O95932	706 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	AGR2	O95994	175 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	UQCRC1	P31930	480 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	IDH3A	P50213	366 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	POLR2J	P52435	117 aa	Known RBP	12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	AQP5	P55064	265 aa		12.76	□□□□□ -0.37

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