RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 AUP1Q9Y679 476 aa3.23□□□□□ -1.89
TRAPPC13-208ENST00000505553 TTC41PQ6P2S7 1318 aa3.23□□□□□ -1.89
TRAPPC13-208ENST00000505553 SERTM2A0A1B0GWG4 89 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 LRP5LA4QPB2 252 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 MPTX1A8MV57 137 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 WRBO00258 174 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 DNALI1O14645 258 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 TAPBPO15533 448 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 CLDN1O95832 211 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 F10P00742 488 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 PATE4P0C8F1 98 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 SELEP16581 610 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 CYP2B6P20813 491 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 RPL4P36578 427 aaKnown RBP3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 RPL13AP40429 203 aaKnown RBP3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 SYKP43405 635 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 MFAP2P55001 183 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 FKBP3Q00688 224 aaKnown RBP3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 TMED1Q13445 227 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 IL18Q14116 193 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 ZIC1Q15915 447 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 MS4A18Q3C1V0 323 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 ZNF876PQ49A33 203 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 SPANXN2Q5MJ10 180 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 ACER2Q5QJU3 275 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 PDZK1Q5T2W1 519 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 C1orf185Q5T7R7 199 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 STAC2Q6ZMT1 411 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 EGFL6Q8IUX8 553 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 DCUN1D3Q8IWE4 304 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 PHC2Q8IXK0 858 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 BPIFB2Q8N4F0 458 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 ARL14Q8N4G2 192 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 MFSD9Q8NBP5 474 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR1L4Q8NGR5 311 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 OR2T6Q8NHC8 308 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 KCNG3Q8TAE7 436 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 TBCKQ8TEA7 893 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 NABP1Q96AH0 204 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 C10orf35Q96D05 121 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 C11orf24Q96F05 449 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 PKNOX2Q96KN3 472 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 CHP1Q99653 195 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 LIME1Q9H400 295 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 ADGRL4Q9HBW9 690 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 NEK6Q9HC98 313 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 POLE4Q9NR33 117 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 ABCC13Q9NSE7 274 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 PLCXD1Q9NUJ7 323 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 TXLNGQ9NUQ3 528 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 RASD1Q9Y272 281 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 POLDIP2Q9Y2S7 368 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 OARD1Q9Y530 152 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 TIMM10BQ9Y5J6 103 aa3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 RPAP1Q9BWH6 1393 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC13-208ENST00000505553 PPIAL4EA0A075B759 164 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 TRGV8A0A0C4DH27 118 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 BTBD17A6NE02 478 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 NCF1BA6NI72 391 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 NCF1CA8MVU1 366 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 ARHGEF33A8MVX0 844 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 TCP11X1B4DZS4 312 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 PRSS44E7EML9 344 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 G3V4G9 280 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 PDHXO00330 501 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 SRPX2O60687 465 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 CLDN9O95484 217 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGLV2-11P01706 119 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 SP1P08047 785 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 ALOX5P09917 674 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 PPIAL4FP0DN26 164 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 NCK1P16333 377 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 SDC1P18827 310 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 MMP11P24347 488 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 NF2P35240 595 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 SPRP35270 261 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 SH3BGRP55822 239 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 GNB1P62873 340 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 OGDHQ02218 1023 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 RAB40BQ12829 278 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 C1orf61Q13536 156 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 SLC5A12Q1EHB4 618 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 GLIPR1L2Q4G1C9 344 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 CAVIN4Q5BKX8 364 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 RAET1LQ5VY80 246 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 REP15Q6BDI9 236 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 ATL3Q6DD88 541 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 OR2A2Q6IF42 318 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 BZW1Q7L1Q6 419 aaKnown RBP3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 CENPQQ7L2Z9 268 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 BIVMQ86UB2 503 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNRF1Q8ND25 227 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 OR51G2Q8NGK0 314 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 FNDC8Q8TC99 324 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 BADQ92934 168 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 EFHD2Q96C19 240 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 RBM4Q9BWF3 364 aaKnown RBP3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 PARLQ9H300 379 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 CLSTN2Q9H4D0 955 aa3.21□□□□□ -1.9
TRAPPC13-208ENST00000505553 IL36GQ9NZH8 169 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms