RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 H2BFMP0C1H6 154 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CCDC159P0C7I6 412 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 UQCRFS1P1P0C7P4 283 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CAPN2P17655 700 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 PGCP20142 388 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 MX1P20591 662 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 LAP3P28838 519 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 SAA4P35542 130 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ETV5P41161 510 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ATP5OP48047 213 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 FNTAP49354 379 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CCT3P49368 545 aaKnown RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 STK19P49842 368 aaPredicted RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ATP4BP51164 291 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 AP3M2P53677 418 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CDH4P55283 916 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 PRMT2P55345 433 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 PEX3P56589 373 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ZNF85Q03923 595 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ZFP36L1Q07352 338 aaKnown RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CD300CQ08708 224 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 FGL1Q08830 312 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 RUNX3Q13761 415 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 EIF2B1Q14232 305 aaKnown RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 EMC2Q15006 297 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CD226Q15762 336 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 KNOP1Q1ED39 458 aaKnown RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 UNC50Q53HI1 259 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CTSL3PQ5NE16 218 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 TCHHL1Q5QJ38 904 aaPredicted RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 BEND6Q5SZJ8 279 aaPredicted RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 DCST2Q5T1A1 773 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ARMC12Q5T9G4 340 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 WDR25Q64LD2 544 aaPredicted RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 EMBQ6PCB8 327 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 BTNL3Q6UXE8 466 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 Q7L0L9 218 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CEACAM19Q7Z692 300 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 FAM228AQ86W67 206 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ERICH1Q86X53 443 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CARM1Q86X55 608 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 LRRC43Q8N309 656 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 SAMD12Q8N8I0 201 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CSNK1G2-AS1Q8NCQ2 148 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 OR5D13Q8NGL4 314 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 OR1B1Q8NGR6 318 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 RAB3IL1Q8TBN0 382 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 BIRC7Q96CA5 298 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 SH3YL1Q96HL8 342 aaPredicted RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 AMDHD1Q96NU7 426 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 TNFRSF13CQ96RJ3 184 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ST6GALNAC5Q9BVH7 336 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 GON7Q9BXV9 100 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 GPR61Q9BZJ8 451 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 POLR3FQ9H1D9 316 aaPredicted RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ADNPQ9H2P0 1102 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 WDR41Q9HAD4 459 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 PLEKHA3Q9HB20 300 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 IL1RL2Q9HB29 575 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 RAB20Q9NX57 234 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 SPATA7Q9P0W8 599 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 GNG12Q9UBI6 72 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ABCD2Q9UBJ2 740 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 EIF3KQ9UBQ5 218 aaKnown RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 PCSK1NQ9UHG2 260 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 ANAPC7Q9UJX3 599 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CDH9Q9ULB4 789 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 NAP1L2Q9ULW6 460 aaPredicted RBP1.89□□□□□ -2.11
LMNB1-207ENST00000494185 RASD1Q9Y272 281 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 CPQQ9Y646 472 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 PCNX3Q9H6A9 2034 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 GRIN2DO15399 1336 aa1.89□□□□□ -2.11
LMNB1-207ENST00000494185 PNPLA6Q8IY17 1366 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 TRBV5-4A0A0C4DH59 114 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 TRBV7-9A0A0J9YWB2 115 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 METTL21EPA6NDL7 271 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 IGLON5A6NGN9 336 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 SNTNA6NMZ2 147 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 L7N2F9 121 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 RANBP6O60518 1105 aaKnown RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 DUSP11O75319 330 aaKnown RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 WBP4O75554 376 aaKnown RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 TSPAN12O95859 305 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 CALCAP01258 141 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 IGHG1P01857 330 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 IGHG3P01860 377 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 ASGR1P07306 291 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 HOXB7P09629 217 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 CCDC130P13994 396 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 POU2F1P14859 743 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 IGFBP5P24593 272 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 UCP1P25874 307 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 CCR1P32246 355 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 RFC4P35249 363 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 EPS15P42566 896 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 SSR1P43307 286 aaKnown RBP1.88□□□□□ -2.11
LMNB1-207ENST00000494185 CASP4P49662 377 aa1.88□□□□□ -2.11
LMNB1-207ENST00000494185 PRRX1P54821 245 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms