RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 MRPL3P09001 348 aaKnown RBP1□□□□□ -2.25
CCDC93-209ENST00000488908 VDAC1P21796 283 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 ADORA2BP29275 332 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 RFC2P35250 354 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 GCKP35557 465 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 KIR2DS2P43631 304 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 RPL29P47914 159 aaKnown RBP1□□□□□ -2.25
CCDC93-209ENST00000488908 CCL11P51671 97 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 NLRP11P59045 1033 aaKnown RBP1□□□□□ -2.25
CCDC93-209ENST00000488908 KIAA1024LP59773 190 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 PLOD1Q02809 727 aaPredicted RBP1□□□□□ -2.25
CCDC93-209ENST00000488908 SRYQ05066 204 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 PPP1R8Q12972 351 aaKnown RBP1□□□□□ -2.25
CCDC93-209ENST00000488908 BTG3Q14201 252 aaPredicted RBP1□□□□□ -2.25
CCDC93-209ENST00000488908 SMU1Q2TAY7 513 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 ZNF699Q32M78 642 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 CMPK2Q5EBM0 449 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 SLX4IPQ5VYV7 408 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 ARSKQ6UWY0 536 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 OLFM4Q6UX06 510 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 HACD2Q6Y1H2 254 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 BNIPLQ7Z465 357 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 YRDCQ86U90 279 aaKnown RBP1□□□□□ -2.25
CCDC93-209ENST00000488908 VPS36Q86VN1 386 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 SERPINA9Q86WD7 417 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 SKA3Q8IX90 412 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 PEX5LQ8IYB4 626 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 TMCO5AQ8N6Q1 288 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 NEK11Q8NG66 645 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 OR2A12Q8NGT7 310 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 IL1F10Q8WWZ1 152 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 CHCHD10Q8WYQ3 142 aaPredicted RBP1□□□□□ -2.25
CCDC93-209ENST00000488908 HAVCR1Q96D42 359 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 C5orf30Q96GV9 206 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 TXN2Q99757 166 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 CBWD1Q9BRT8 395 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 NDUFAF3Q9BU61 184 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 FUT8Q9BYC5 575 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 KAT8Q9H7Z6 458 aaKnown RBP1□□□□□ -2.25
CCDC93-209ENST00000488908 GHRLQ9UBU3 117 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 COPS7AQ9UBW8 275 aa1□□□□□ -2.25
CCDC93-209ENST00000488908 ZNF490Q9ULM2 529 aaPredicted RBP1□□□□□ -2.25
CCDC93-209ENST00000488908 NPC1L1Q9UHC9 1359 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 TUBAL3A6NHL2 446 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 EFNA2O43921 213 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 HSF2BPO75031 334 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 TRIM3O75382 744 aaPredicted RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 SCRG1O75711 98 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 AKAP3O75969 853 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 KLF8O95600 359 aaPredicted RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 JCHAINP01591 159 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 IGHV3-48P01763 117 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 OR8U8P0C7N1 319 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 BCKDHAP12694 445 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 GNSP15586 552 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 IGLL1P15814 213 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 H2AFXP16104 143 aaPredicted RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 GCFC2P16383 781 aaKnown RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 PRDX3P30048 256 aaKnown RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 ATP5DP30049 168 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 HPDP32754 393 aaPredicted RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 PITPNBP48739 271 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 CCR6P51684 374 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 CASP9P55211 416 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 MRPS11P82912 194 aaKnown RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 VLDLRP98155 873 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 ZP4Q12836 540 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 SLMAPQ14BN4 828 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 MORF4L2Q15014 288 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 KARSQ15046 597 aaKnown RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 ZKSCAN8Q15776 578 aaPredicted RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 PNCKQ6P2M8 343 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 WDR74Q6RFH5 385 aaPredicted RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 RNF165Q6ZSG1 346 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 TOM1L2Q6ZVM7 507 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 HSD11B1LQ7Z5J1 315 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 NET1Q7Z628 596 aaPredicted RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 LCA5Q86VQ0 697 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 AMZ2Q86W34 360 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 C17orf82Q86X59 251 aaPredicted RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 C6orf223Q8N319 242 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 BPIFB2Q8N4F0 458 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 TMEM252Q8N6L7 170 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 OR51G1Q8NGK1 321 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 WDR36Q8NI36 951 aaKnown RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 ZCCHC13Q8WW36 166 aaKnown RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 PHYHIPQ92561 330 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 RMI2Q96E14 147 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 CCDC51Q96ER9 411 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 NOL4LQ96MY1 436 aaPredicted RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 TSNARE1Q96NA8 513 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 NAP1L3Q99457 506 aaPredicted RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 FANCFQ9NPI8 374 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 NANSQ9NR45 359 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 COMMD8Q9NX08 183 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 ZNF586Q9NXT0 402 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 BCAP29Q9UHQ4 241 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 DUSP12Q9UNI6 340 aa0.99□□□□□ -2.25
CCDC93-209ENST00000488908 EIF3LQ9Y262 564 aaKnown RBP0.99□□□□□ -2.25
CCDC93-209ENST00000488908 TTC26A0AVF1 554 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms