RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 OR7D2Q96RA2 312 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 DDOQ99489 341 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 MGAT4CQ9UBM8 478 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 RCE1Q9Y256 329 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 IGLON5A6NGN9 336 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 L7N2F9 121 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 RASGRP1O95267 797 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 ASGR2P07307 311 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 RAB3BP20337 219 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 NT5EP21589 574 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 F8A1P23610 371 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 BSGP35613 385 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 VIPR2P41587 438 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 MAGEB1P43366 347 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 PXNP49023 591 aaPredicted RBP11.88□□□□□ -0.51
VPS52-218ENST00000482399 FNTBP49356 437 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 ZBTB37Q5TC79 503 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 ALKAL2Q6UX46 152 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 GRASPQ7Z6J2 395 aaPredicted RBP11.88□□□□□ -0.51
VPS52-218ENST00000482399 OR4E2Q8NGC2 313 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 OR4K13Q8NH42 304 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 CREB3L1Q96BA8 519 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 ERMAPQ96PL5 475 aaPredicted RBP11.88□□□□□ -0.51
VPS52-218ENST00000482399 RSPO3Q9BXY4 272 aaPredicted RBP11.88□□□□□ -0.51
VPS52-218ENST00000482399 C6orf106Q9H6K1 298 aaPredicted RBP11.88□□□□□ -0.51
VPS52-218ENST00000482399 SIRT3Q9NTG7 399 aaPredicted RBP11.88□□□□□ -0.51
VPS52-218ENST00000482399 NLGN3Q9NZ94 848 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 MRPS23Q9Y3D9 190 aaKnown RBP11.88□□□□□ -0.51
VPS52-218ENST00000482399 CDH10Q9Y6N8 788 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 GREM1O60565 184 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 PRNPP04156 253 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 MMP12P39900 470 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 ARHGDIBP52566 201 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 PDX1P52945 283 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 EXOSC2Q13868 293 aaKnown RBP11.88□□□□□ -0.51
VPS52-218ENST00000482399 GXYLT1Q4G148 440 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 DEFB134Q4QY38 66 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 MPP7Q5T2T1 576 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 C1orf94Q6P1W5 598 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 ACOT4Q8N9L9 421 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 OR13C2Q8NGS9 318 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 GHSRQ92847 366 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 SGPP1Q9BX95 441 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 AUNIPQ9H7T9 357 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 POLHQ9Y253 713 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 PCYT1BQ9Y5K3 369 aaPredicted RBP11.88□□□□□ -0.51
VPS52-218ENST00000482399 SIRT4Q9Y6E7 314 aaPredicted RBP11.88□□□□□ -0.51
VPS52-218ENST00000482399 AP1M2Q9Y6Q5 423 aa11.88□□□□□ -0.51
VPS52-218ENST00000482399 MEIS3P1A6NDR6 274 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 A8MVJ9 347 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 ARPC1BO15143 372 aaKnown RBP11.87□□□□□ -0.51
VPS52-218ENST00000482399 PPP1R3DO95685 299 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 LGI1O95970 557 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 ADH1AP07327 375 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 EDNRAP25101 427 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 BLVRAP53004 296 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 AGERQ15109 404 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 LRRC28Q86X40 367 aaPredicted RBP11.87□□□□□ -0.51
VPS52-218ENST00000482399 ZNF547Q8IVP9 402 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 SPERTQ8NA61 448 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 PFN4Q8NHR9 129 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 DHRS9Q9BPW9 319 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 SEC22CQ9BRL7 303 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 MARVELD1Q9BSK0 173 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 UBQLN3Q9H347 655 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 DIABLOQ9NR28 239 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 KCNN3Q9UGI6 736 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 TESQ9UGI8 421 aaKnown RBP11.87□□□□□ -0.51
VPS52-218ENST00000482399 MAB21L2Q9Y586 359 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 VWA8A3KMH1 1905 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 SLC31A1O15431 190 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 FLRT2O43155 660 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 HK1P19367 917 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 TBXA2RP21731 343 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 MAPK9P45984 424 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 VEGFCP49767 419 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 TMEM201Q5SNT2 666 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 TEX261Q6UWH6 196 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 CPXM2Q8N436 756 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 SRFBP1Q8NEF9 429 aaKnown RBP11.87□□□□□ -0.51
VPS52-218ENST00000482399 OR11H7Q8NGC8 314 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 OR11H4Q8NGC9 324 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 OR4D9Q8NGE8 314 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 PDCD1LG2Q9BQ51 273 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 LGR4Q9BXB1 951 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 CCDC86Q9H6F5 360 aaKnown RBP11.87□□□□□ -0.51
VPS52-218ENST00000482399 SESN1Q9Y6P5 492 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 U3KQ87 197 aa11.87□□□□□ -0.51
VPS52-218ENST00000482399 LRRN3E7EW58 273 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 NPIPB8E9PQR5 432 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 ARPC5O15511 151 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 PKLRP30613 574 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 KIAA1024LP59773 190 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 CDK5Q00535 292 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 LAMTOR1Q6IAA8 161 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 POMZP3Q6PJE2 187 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 C9orf62Q8N4C0 152 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 SDR9C7Q8NEX9 313 aa11.86□□□□□ -0.51
VPS52-218ENST00000482399 ACOT11Q8WXI4 607 aaPredicted RBP11.86□□□□□ -0.51
VPS52-218ENST00000482399 NXPE2Q96DL1 559 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms