RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	CMTM8	Q8IZV2	173 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	OR6T1	Q8NGN1	323 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	OR10K1	Q8NGX5	313 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TM9SF4	Q92544	642 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LRR1	Q96L50	414 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZNF583	Q96ND8	569 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	THAP7	Q9BT49	309 aa	Predicted RBP	5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	POLDIP3	Q9BY77	421 aa	Known RBP	5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SLC6A17	Q9H1V8	727 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	MMP28	Q9H239	520 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	HRH4	Q9H3N8	390 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PIGM	Q9H3S5	423 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SUV39H2	Q9H5I1	410 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	C8orf33	Q9H7E9	229 aa	Predicted RBP	5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LSM5	Q9Y4Y9	91 aa	Known RBP	5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ASB1	Q9Y576	335 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RNF215	Q9Y6U7	377 aa		5.77	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TRAV18	A0A075B6X5	111 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997		A0A1B0GVT2	93 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ANKRD34B	A5PLL1	514 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZNF736	B4DX44	427 aa	Predicted RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TLL1	O43897	1013 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	WNT4	P56705	351 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	MGAT3	Q09327	533 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	KEAP1	Q14145	624 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	DECR1	Q16698	335 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CTSL3P	Q5NE16	218 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TIGD3	Q6B0B8	471 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ALKBH2	Q6NS38	261 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZC3H14	Q6PJT7	736 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	KIAA1324	Q6UXG2	1013 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CHST9	Q7L1S5	443 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ABHD13	Q7L211	337 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CACUL1	Q86Y37	369 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZNF679	Q8IYX0	411 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZNF461	Q8TAF7	563 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	DAZAP1	Q96EP5	407 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	MYEOV	Q96EZ4	313 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	BSCL2	Q96G97	398 aa	Predicted RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	FAM83C	Q9BQN1	747 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	OR52A5	Q9H2C5	316 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RDH14	Q9HBH5	336 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZNF286A	Q9HBT8	521 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	GCM1	Q9NP62	436 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	IL26	Q9NPH9	171 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PRDM9	Q9NQV7	894 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	POLH	Q9Y253	713 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	NOX1	Q9Y5S8	564 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	KPTN	Q9Y664	436 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997		A0A1W2PQ09	198 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CD8B2	A6NJW9	211 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	EIF3F	O00303	357 aa	Predicted RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	BRINP1	O60477	761 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PEX11B	O96011	259 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CD8B	P10966	210 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	NDUFV2	P19404	249 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CASR	P41180	1078 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RIDA	P52758	137 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	NDUFA6	P56556	154 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	VAMP3	Q15836	100 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	BAK1	Q16611	211 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RTL6	Q6ICC9	239 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TSSK4	Q6SA08	328 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LRRC28	Q86X40	367 aa	Predicted RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	BAGE3	Q86Y29	109 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	BAGE2	Q86Y30	109 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SLC35F3	Q8IY50	421 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	LFNG	Q8NES3	379 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	BRIX1	Q8TDN6	353 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ZBTB8A	Q96BR9	441 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	RAB3C	Q96E17	227 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	EGLN2	Q96KS0	407 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CNN2	Q99439	309 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	DPH2	Q9BQC3	489 aa	Predicted RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	INPP5K	Q9BT40	448 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	HDHD5	Q9BXW7	423 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CERS4	Q9HA82	394 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	MRPS30	Q9NP92	439 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SDHAF2	Q9NX18	166 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	OARD1	Q9Y530	152 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	POMT1	Q9Y6A1	747 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	NUMA1	Q14980	2115 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	IGLV3-10	A0A075B6K4	115 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997		A0A1W2PPV4	95 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ARNTL	O00327	626 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SAP18	O00422	153 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	SMAD6	O43541	496 aa	Known RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	JRK	O75564	520 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	MED6	O75586	246 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	IL1A	P01583	271 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	MT-ND4L	P03901	98 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	GBA	P04062	536 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	TP53	P04637	393 aa	Predicted RBP	5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	ALPL	P05186	524 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CYBA	P13498	195 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	CPN1	P15169	458 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	DDC	P20711	480 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	UQCRC2	P22695	453 aa		5.76	□□□□□ -1.49
HNRNPU-208	ENST00000475997	PBX2	P40425	430 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms