RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 KCNJ15Q99712 375 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 GDF15Q99988 308 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 ZNF426Q9BUY5 554 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 C11orf54Q9H0W9 315 aaPredicted RBP11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 KCNN2Q9H2S1 579 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 TIGARQ9NQ88 270 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 NCKAP1Q9Y2A7 1128 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 NTNG1Q9Y2I2 539 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 N6AMT1Q9Y5N5 214 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 SPACA6W5XKT8 324 aa11.63□□□□□ -0.55
ECHDC1-209ENST00000454591 FANCMQ8IYD8 2048 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 CCDC182A6NF36 153 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC22A31A6NKX4 558 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 GTPBP1O00178 669 aaKnown RBP11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 CASKO14936 926 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC31A1O15431 190 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 HRO43593 1189 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 BRINP1O60477 761 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 PTP4A3O75365 173 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 RGS9O75916 674 aaPredicted RBP11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 NKX2-2O95096 273 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 NTN1O95631 604 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 COL9A1P20849 921 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 DRD5P21918 477 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 HNRNPA2B1P22626 353 aaKnown RBP11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 S100A1P23297 94 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 RBM34P42696 430 aaKnown RBP11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 TAS2R43P59537 309 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 FOXK2Q01167 660 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 GALEQ14376 348 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 GAS6Q14393 721 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 OR1Q1Q15612 314 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 MAPK14Q16539 360 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 PRICKLE4Q2TBC4 344 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 ENPP7Q6UWV6 458 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 MEX3DQ86XN8 651 aaKnown RBP11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 GPALPP1Q8IXQ4 340 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 TEX19Q8NA77 164 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 ATP6V1C2Q8NEY4 427 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 NEIL3Q8TAT5 605 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 BAHD1Q8TBE0 780 aaPredicted RBP11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC7A6Q92536 515 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 CD180Q99467 661 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 ZNF559Q9BR84 538 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 MFRPQ9BY79 579 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 RNF32Q9H0A6 362 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 RNF121Q9H920 327 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 POT1Q9NUX5 634 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 BABAM2Q9NXR7 383 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 MAT2BQ9NZL9 334 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 KCNE5Q9UJ90 142 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 SIGLEC7Q9Y286 467 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
ECHDC1-209ENST00000454591 PRR23AA6NEV1 266 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 ANKRD61A6NGH8 418 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 GRXCR1A8MXD5 290 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 SOCS6O14544 535 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 RNF13O43567 381 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 PLPP2O43688 288 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 APOL3O95236 402 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 HOXB2P14652 356 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 CELP19835 753 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 MAKP20794 623 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC2A5P22732 501 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 AK4P27144 223 aaPredicted RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 MAT2AP31153 395 aaKnown RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 ACTR1BP42025 376 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 SEC13P55735 322 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 ACTR1AP61163 376 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 SIM1P81133 766 aaPredicted RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 HOXC5Q00444 222 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 AMZ1Q400G9 498 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 DEFB134Q4QY38 66 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 TRMT12Q53H54 448 aaKnown RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 PYDC2Q56P42 97 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 MRPL2Q5T653 305 aaKnown RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 PRPF38BQ5VTL8 546 aaKnown RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 TIGD3Q6B0B8 471 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 FAM109BQ6ICB4 259 aaPredicted RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 CNIH2Q6PI25 160 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 SMARCD3Q6STE5 483 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 WDR88Q6ZMY6 472 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 SHFQ7M4L6 423 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 TPRA1Q86W33 373 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 SIRT6Q8N6T7 355 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 BBS1Q8NFJ9 593 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 FANK1Q8TC84 345 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 JPH3Q8WXH2 748 aaPredicted RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 SIPA1Q96FS4 1042 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 FCRL4Q96PJ5 515 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 DCLRE1CQ96SD1 692 aaKnown RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 RBFOX1Q9NWB1 397 aaKnown RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 TOR4AQ9NXH8 423 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 CLDND1Q9NY35 253 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 IL20RAQ9UHF4 553 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 SLC35A3Q9Y2D2 325 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 YBX2Q9Y2T7 364 aaKnown RBP11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 HS3ST3A1Q9Y663 406 aa11.61□□□□□ -0.55
ECHDC1-209ENST00000454591 CSNK1G3Q9Y6M4 447 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms