RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 ARSGQ96EG1 525 aa12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 GMPPAQ96IJ6 420 aaPredicted RBP12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 APOPT1Q96IL0 206 aa12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 C3orf30Q96M34 536 aa12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 FAM111AQ96PZ2 611 aa12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 SLC39A3Q9BRY0 314 aa12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 UBQLN4Q9NRR5 601 aa12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 DUSP22Q9NRW4 184 aa12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 GIN1Q9NXP7 522 aa12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 SLC17A7Q9P2U7 560 aa12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 GIMAP2Q9UG22 337 aa12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 EIF3LQ9Y262 564 aaKnown RBP12.9□□□□□ -0.34
TNFRSF1A-203ENST00000437813 A0A0J9YW62 118 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PIP5K1BO14986 540 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SCAMP2O15127 329 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OIP5O43482 229 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 HMGN2P05204 90 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 NUDT17P0C025 328 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 LAMP1P11279 417 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SHC1P29353 583 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ASMTP46597 345 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 RPS3AP61247 264 aaKnown RBP12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CCNJQ5T5M9 372 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CPTPQ5TA50 214 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 RIMKLAQ8IXN7 391 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 GATSQ8NAP1 163 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OR7A2PQ8NGA2 310 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OR6K3Q8NGY3 331 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OR2W6PQ8NHA6 318 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZBTB8AQ96BR9 441 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OTUB1Q96FW1 271 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 RNF145Q96MT1 663 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 STACQ99469 402 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 MED18Q9BUE0 208 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 MECRQ9BV79 373 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 BTBD2Q9BX70 525 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PIGUQ9H490 435 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ANKZF1Q9H8Y5 726 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 HHATLQ9HCP6 504 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 GPATCH2Q9NW75 528 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZNF226Q9NYT6 803 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SH3BP4Q9P0V3 963 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 LGALS13Q9UHV8 139 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 MID2Q9UJV3 735 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 FIS1Q9Y3D6 152 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 TRAF6Q9Y4K3 522 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CADP27708 2225 aa12.89□□□□□ -0.35
TNFRSF1A-203ENST00000437813 EIF1AYO14602 144 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 GMFGO60234 142 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 NTN1O95631 604 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 INHBBP09529 407 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 GPC1P35052 558 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 EIF1AXP47813 144 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PRIM2P49643 509 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PRKAG1P54619 331 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ZNF117Q03924 483 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ACKR1Q16570 336 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 KLHL26Q53HC5 615 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 LRIG3Q6UXM1 1119 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 WDR75Q8IWA0 830 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CIARTQ8N365 385 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CCDC63Q8NA47 563 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 COQ8BQ96D53 544 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PIK3IP1Q96FE7 263 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 COX4I2Q96KJ9 171 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 TMEM204Q9BSN7 226 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PAQR5Q9NXK6 330 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PROCRQ9UNN8 238 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 KCNE3Q9Y6H6 103 aa12.88□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ETV2O00321 342 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CXCL13O43927 109 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 HSPA4LO95757 839 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ALOX5P09917 674 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SERPINB4P48594 390 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 C21orf58P58505 322 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 POU6F2P78424 691 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 LTBQ06643 244 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PTGR1Q14914 329 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 SGCBQ16585 318 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 GALNTL6Q49A17 601 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 Q5PR19 223 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 C6orf136Q5SQH8 315 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CDC73Q6P1J9 531 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CBLN3Q6UW01 205 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PRSS57Q6UWY2 283 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 ESPNLQ6ZVH7 1005 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 R3HCC1LQ7Z5L2 792 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 MISPQ8IVT2 679 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 COX18Q8N8Q8 333 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 OR2V1Q8NHB1 315 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 RNF128Q8TEB7 428 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CDS1Q92903 461 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 PIGTQ969N2 578 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 IQCGQ9H095 443 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 CXorf36Q9H7Y0 433 aa12.87□□□□□ -0.35
TNFRSF1A-203ENST00000437813 GLRX2Q9NS18 164 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms