RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SEC14L5O43304 696 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 ERLIN1O75477 346 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 TNFSF13O75888 250 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 NPIPA8P0DM63 369 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 HPGDP15428 266 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 RNF144AP50876 292 aaPredicted RBP15.95■□□□□ 0.14
LSM5-204ENST00000409909 SLC18A1P54219 525 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 KLHL26Q53HC5 615 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 C6orf120Q7Z4R8 191 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 GGNQ86UU5 652 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 LRRC34Q8IZ02 419 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 ACTRT2Q8TDY3 377 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 LRRC46Q96FV0 321 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 MED17Q9NVC6 651 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 FOXD3Q9UJU5 478 aaPredicted RBP15.95■□□□□ 0.14
LSM5-204ENST00000409909 AP4B1Q9Y6B7 739 aa15.95■□□□□ 0.14
LSM5-204ENST00000409909 A0A087WZY1 265 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 A0A1W2PNV4 684 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 NPIPB9F8W1W9 429 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 OIP5O43482 229 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 TNFRSF21O75509 655 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 CTAG2O75638 210 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 KRT16P08779 473 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 ALDOCP09972 364 aaKnown RBP15.94■□□□□ 0.14
LSM5-204ENST00000409909 PSMA4P25789 261 aaKnown RBP15.94■□□□□ 0.14
LSM5-204ENST00000409909 SOAT1P35610 550 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 EEFSECP57772 596 aaKnown RBP15.94■□□□□ 0.14
LSM5-204ENST00000409909 PLPPR5Q32ZL2 321 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.94■□□□□ 0.14
LSM5-204ENST00000409909 OGFOD2Q6N063 350 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 CHMP1BQ7LBR1 199 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 LUZP2Q86TE4 346 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 CDH24Q86UP0 819 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 TMEM200AQ86VY9 491 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 ANKRD46Q86W74 232 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 MISPQ8IVT2 679 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 GTPBP8Q8N3Z3 284 aaPredicted RBP15.94■□□□□ 0.14
LSM5-204ENST00000409909 OR4A15Q8NGL6 344 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 SMPDL3BQ92485 455 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 TESCQ96BS2 214 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 ZNF845Q96IR2 970 aaPredicted RBP15.94■□□□□ 0.14
LSM5-204ENST00000409909 TEX37Q96LM6 180 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 PINK1Q9BXM7 581 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 WDR55Q9H6Y2 383 aaPredicted RBP15.94■□□□□ 0.14
LSM5-204ENST00000409909 HHATLQ9HCP6 504 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 THAP1Q9NVV9 213 aa15.94■□□□□ 0.14
LSM5-204ENST00000409909 RNF103-CHMP3A0A140T963 221 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 PRSS51A0A1B0GVH4 220 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 FAM221AA4D161 298 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 SOX30O94993 753 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 OPN1LWP04000 364 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 ZNF17P17021 662 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 ATP6V1C1P21283 382 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 MATN1P21941 496 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 PEX19P40855 299 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 CASP9P55211 416 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 NME5P56597 212 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 ZNF117Q03924 483 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 FLYWCH1Q4VC44 716 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 SPANXN4Q5MJ08 99 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 BHLHB9Q6PI77 547 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 CBLN3Q6UW01 205 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 P4HA3Q7Z4N8 544 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 WDR75Q8IWA0 830 aaKnown RBP15.93■□□□□ 0.14
LSM5-204ENST00000409909 METTL25Q8N6Q8 603 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 B4GALNT2Q8NHY0 566 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 FNDC9Q8TBE3 224 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 POC1BQ8TC44 478 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 PHOSPHO1Q8TCT1 267 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 FAM222BQ8WU58 562 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 NRGNQ92686 78 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 STARD4Q96DR4 205 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 SDF2Q99470 211 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 RBM24Q9BX46 236 aaKnown RBP15.93■□□□□ 0.14
LSM5-204ENST00000409909 HOXD1Q9GZZ0 328 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 ACBD3Q9H3P7 528 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 MARCOQ9UEW3 520 aaPredicted RBP15.93■□□□□ 0.14
LSM5-204ENST00000409909 ITGB1BP2Q9UKP3 347 aa15.93■□□□□ 0.14
LSM5-204ENST00000409909 ABCA4P78363 2273 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 GOLGA8QA0A0J9YX86 632 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 C7orf72A4D263 438 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 GOLGA8OA6NCC3 632 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 A8MXE2 369 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 GOLGA8NF8WBI6 632 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 HDAC3O15379 428 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 CPSF4O95639 269 aaKnown RBP15.92■□□□□ 0.14
LSM5-204ENST00000409909 C1QCP02747 245 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 LINGO3P0C6S8 592 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 KITP10721 976 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 IL11P20809 199 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 EPHA3P29320 983 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 KIR2DL2P43627 348 aaPredicted RBP15.92■□□□□ 0.14
LSM5-204ENST00000409909 ATP12AP54707 1039 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 UFM1P61960 85 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 OCRLQ01968 901 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 CASP8Q14790 479 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 PON3Q15166 354 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 NDUFAF6Q330K2 333 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 ANXA8L1Q5VT79 327 aa15.92■□□□□ 0.14
LSM5-204ENST00000409909 VWA1Q6PCB0 445 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms