RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 EVPLQ92817 2033 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 A0A0A6YYC8 382 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 I3L1I5 382 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF195O14628 629 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 PRAF2O60831 178 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 CPMP14384 443 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 HMGA1P17096 107 aaKnown RBP16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 CLDN2P57739 230 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 HOXC5Q00444 222 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 ILKQ13418 452 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 PIP5KL1Q5T9C9 394 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 HES5Q5TA89 166 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 COQ8AQ8NI60 647 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 MYLIPQ8WY64 445 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 HOXB13Q92826 284 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 OR1F2PQ96R84 312 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 C1QTNF3Q9BXJ4 246 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 MED17Q9NVC6 651 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 TAS2R3Q9NYW6 316 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 MYO7AQ13402 2215 aa16.05■□□□□ 0.16
TRAPPC11-201ENST00000334690 F5P12259 2224 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 TRAV18A0A075B6X5 111 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 CTDSP2O14595 271 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 CCNOP22674 350 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 SLC6A11P48066 632 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 Q6ZPB1 254 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 TBC1D15Q8TC07 691 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 OR10A4Q9H209 315 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 PPIL3Q9H2H8 161 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 A0A1W2PQ09 198 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 EGFP01133 1207 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 SYPP08247 313 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 COL28A1Q2UY09 1125 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 LEXMQ3ZCV2 418 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 METTL11BQ5VVY1 283 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 PARP16Q8N5Y8 322 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 ADAMTS14Q8WXS8 1223 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 FAM3CQ92520 227 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 DHRS1Q96LJ7 313 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 INSM2Q96T92 566 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 DPCDQ9BVM2 203 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 MS4A8Q9BY19 250 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 TMEM38AQ9H6F2 299 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 NT5DC2Q9H857 520 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 TMEM30AQ9NV96 361 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 MRPL15Q9P015 296 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 BORCS7-ASMTA0A0B4J1R7 106 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 PRSS38A1L453 326 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 J3KTA2 159 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 DNAJB6O75190 326 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 JUNBP17275 347 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 ADARB1P78563 741 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 DLEU7Q6UYE1 221 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 MEPCEQ7L2J0 689 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 NEURL3Q96EH8 262 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 C7orf50Q9BRJ6 194 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF701Q9NV72 531 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 AK6Q9Y3D8 172 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 C17orf105B2RV13 164 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 LDB3O75112 727 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 AIFM1O95831 613 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 JMJD7P0C870 316 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 AMY2BP19961 511 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 KCNJ10P78508 379 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 CHRNEQ04844 493 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 NKAPLQ5M9Q1 402 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 SLC6A19Q695T7 634 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 RNF113BQ8IZP6 322 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 FTMTQ8N4E7 242 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF740Q8NDX6 193 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 CHPT1Q8WUD6 406 aa16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 TESQ9UGI8 421 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-201ENST00000334690 GABARAPO95166 117 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 GASTP01350 101 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 CR2P20023 1033 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 GJA4P35212 333 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 NR0B1P51843 470 aaKnown RBP16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 HMBOX1Q6NT76 420 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF704Q6ZNC4 412 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 LINC00299Q6ZSB3 139 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 VRK2Q86Y07 508 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 MCATQ8IVS2 390 aaKnown RBP16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF486Q96H40 463 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 TMEM185BQ9H7F4 350 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF443Q9Y2A4 671 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 PCDHGA3Q9Y5H0 932 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 NUBP2Q9Y5Y2 271 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 TRBV4-1A0A0J9YWV2 114 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 ACOT7O00154 380 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 PTGER1P34995 402 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 GALK2Q01415 458 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 RPE65Q16518 533 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 LRRC28Q86X40 367 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 VRK3Q8IV63 474 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 NAXEQ8NCW5 288 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 SDR9C7Q8NEX9 313 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 SLC7A13Q8TCU3 470 aa16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 ZNF587Q96SQ5 575 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC11-201ENST00000334690 NAALAD2Q9Y3Q0 740 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms