RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 TMIEQ8NEW7 156 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 OR4E2Q8NGC2 313 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 OR6C4Q8NGE1 309 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 DNAJA4Q8WW22 397 aaPredicted RBP18.5■□□□□ 0.55
CRLF3-201ENST00000324238 ACOT11Q8WXI4 607 aaPredicted RBP18.5■□□□□ 0.55
CRLF3-201ENST00000324238 RFKQ969G6 155 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 TIMP4Q99727 224 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 MRPL15Q9P015 296 aaKnown RBP18.5■□□□□ 0.55
CRLF3-201ENST00000324238 PCDHGB7Q9Y5F8 929 aa18.5■□□□□ 0.55
CRLF3-201ENST00000324238 NUP210Q8TEM1 1887 aaPredicted RBP18.49■□□□□ 0.55
CRLF3-201ENST00000324238 WDR87Q6ZQQ6 2873 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 J3QLW9 94 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 GNB5O14775 395 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 ORC5O43913 435 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 ZNF19P17023 458 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 MAKP20794 623 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 PAICSP22234 425 aaKnown RBP18.49■□□□□ 0.55
CRLF3-201ENST00000324238 FGL2Q14314 439 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 KIAA1211LQ6NV74 962 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 THSD4Q6ZMP0 1018 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 AMIGO1Q86WK6 493 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 PEX5LQ8IYB4 626 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 TCTE3Q8IZS6 198 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 ARL14Q8N4G2 192 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 OR8H1Q8NGG4 311 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 OSTF1Q92882 214 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 MS4A3Q96HJ5 214 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 BTBD1Q9H0C5 482 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 WDR26Q9H7D7 661 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 EMC8O43402 210 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 F3P13726 295 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 FXYD6P3P58550 94 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 PRR5P85299 388 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 RFLNBQ8N5W9 214 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.49■□□□□ 0.55
CRLF3-201ENST00000324238 DUSP18Q8NEJ0 188 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 OR2T33Q8NG76 320 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 ORAI3Q9BRQ5 295 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 IL20Q9NYY1 176 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 COQ3Q9NZJ6 369 aa18.49■□□□□ 0.55
CRLF3-201ENST00000324238 TRAV27A0A087WT01 109 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 DAPL1A0PJW8 107 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 LINC01553A4QN01 128 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 RPN2P04844 631 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 MPIP34949 423 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 RAB28P51157 221 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 ADAM15Q13444 863 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 ARHGAP19Q14CB8 494 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 IRF4Q15306 451 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 DUSP6Q16828 381 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 PUS10Q3MIT2 529 aaKnown RBP18.48■□□□□ 0.55
CRLF3-201ENST00000324238 SLC48A1Q6P1K1 146 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 TRILQ7L0X0 811 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 OR4D9Q8NGE8 314 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 GCDHQ92947 438 aaPredicted RBP18.48■□□□□ 0.55
CRLF3-201ENST00000324238 ARHGDIGQ99819 225 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 MARVELD1Q9BSK0 173 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 OR52D1Q9H346 318 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 ADAP2Q9NPF8 381 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 USP36Q9P275 1121 aaKnown RBP18.48■□□□□ 0.55
CRLF3-201ENST00000324238 CES1P1Q9UKY3 287 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 A0A1W2PRG6 482 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 CASC3O15234 703 aaKnown RBP18.48■□□□□ 0.55
CRLF3-201ENST00000324238 NDUFV2P19404 249 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 PEBP1P30086 187 aaKnown RBP18.48■□□□□ 0.55
CRLF3-201ENST00000324238 OR12D2P58182 307 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 SF3A2Q15428 464 aaKnown RBP18.48■□□□□ 0.55
CRLF3-201ENST00000324238 VITQ6UXI7 678 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 ZNF765Q7L2R6 523 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 CEACAM19Q7Z692 300 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 ZNF614Q8N883 585 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 GALNT6Q8NCL4 622 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 OR14C36Q8NHC7 312 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 WFIKKN2Q8TEU8 576 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 MAT2BQ9NZL9 334 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 C1QTNF3-AMACRE9PGA6 284 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 BTN3A3O00478 584 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 PEX12O00623 359 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 C1QBP02746 253 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 CXCL3P19876 107 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 HTR1FP30939 366 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 CCR6P51684 374 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 TRMT12Q53H54 448 aaKnown RBP18.48■□□□□ 0.55
CRLF3-201ENST00000324238 MZT2AQ6P582 158 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 FRRS1Q6ZNA5 592 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 NATD1Q8N6N6 113 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 OR13C2Q8NGS9 318 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 HCAR2Q8TDS4 363 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 KIAA1143Q96AT1 154 aaPredicted RBP18.48■□□□□ 0.55
CRLF3-201ENST00000324238 KCNJ15Q99712 375 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 KLHL28Q9NXS3 571 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 WDR45Q9Y484 360 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 ZNF780BQ9Y6R6 833 aa18.48■□□□□ 0.55
CRLF3-201ENST00000324238 A0A1W2PQ72 361 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 NFATC1O95644 943 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 TEAD1P28347 426 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 P2RX3P56373 397 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 RPA4Q13156 261 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 DUSP5Q16690 384 aa18.47■□□□□ 0.55
CRLF3-201ENST00000324238 TJAP1Q5JTD0 557 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms