RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Flrt2Q8BLU0 660 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Arrb1Q8BWG8 418 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cpne1Q8C166 536 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 CenpiQ8K1K4 746 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Rnf121Q8R1Z9 327 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Osgin1Q8VC10 478 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Lipt1Q8VCM4 373 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr551Q8VG23 315 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Rpl14Q9CR57 217 aaKnown RBP14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 ApmapQ9D7N9 415 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Dclk1Q9JLM8 756 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ilf3Q9Z1X4 898 aaKnown RBP14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Kcnk7Q9Z2T1 307 aa14.68□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 IghdA0A0A6YW14 291 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm8020F6WLE9 229 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Obox6G3X9U1 347 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 NlkO54949 527 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Chil6Q80W26 440 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Slc15a3Q8BPX9 578 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Slc26a9Q8BU91 790 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Lrrtm3Q8BZ81 582 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 ExogQ8C163 368 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Uhrf1Q8VDF2 782 aaKnown RBP14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cst14Q8VII3 130 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Papd4Q91YI6 484 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Izumo1Q9D9J7 397 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ccdc107Q9DCC3 242 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cldn6Q9Z262 219 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm21972J3QN38 98 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Rhox2hK7N6P1 191 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 ComtO88587 265 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Apcdd1Q3U128 514 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ptpn21Q62136 1176 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Eri1Q7TMF2 345 aaKnown RBP14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cdc123Q8CII2 336 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cacul1Q8R0X2 377 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Med28Q920D3 178 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Toe1Q9D2E2 511 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Asb12Q9D738 308 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Fem1aaQ9Z2G1 654 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm13283A0A087WPG5 182 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tcrg-V3A0A0G2JEW2 117 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 FaimlJ3QPY3 178 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Dlx2P40764 332 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 ManealQ6P1J0 452 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ubfd1Q78JW9 368 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Slc34a3Q80SU6 601 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 SuoxQ8R086 546 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 SgtbQ8VD33 304 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Sec23bQ9D662 767 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Bco1Q9JJS6 566 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Acss2Q9QXG4 701 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 ProdhQ9WU79 599 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Mthfd2lD3YZG8 338 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Nthl1O35980 300 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tmco2P0C1V4 183 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 EvlP70429 414 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Eci3Q78JN3 317 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Esrp2Q8K0G8 717 aaKnown RBP14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr63Q8VBW9 316 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ogfrl1Q8VE52 464 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr1093Q8VF14 322 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gbgt1Q8VI38 347 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 FcrlaQ920A9 352 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Mgat2Q921V5 442 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Mlf2Q99KX1 247 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Avpr1bQ9WU02 421 aa14.67□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr1006A2ALD2 312 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm14862B1AV28 81 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Zfp934K7N6H3 473 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Vmn2r95L7N274 845 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Sox3P53784 375 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Methig1Q76I26 264 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Rasgef1bQ8JZL7 473 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Acot7Q91V12 381 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Zdhhc13Q9CWU2 622 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Arv1Q9D0U9 266 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Zfp54E9PW05 585 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gcm2O09102 504 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 P01668 110 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 HbaP01942 142 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Defb25Q30KN8 71 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm12258Q5NC63 627 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Brinp2Q6DFY8 783 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Rcbtb1Q6NXM2 531 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Mettl20Q80ZM3 255 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Yod1Q8CB27 343 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Nmral1Q8K2T1 309 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Plcz1Q8K4D7 647 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 C1qtnf3Q9ES30 246 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 SncgQ9Z0F7 123 aaKnown RBP14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr1206A2ATJ9 307 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Mllt6B1AR10 1109 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Vmn1r16K7N775 303 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Opn1mwO35599 359 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 FxnO35943 207 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 CfpP11680 464 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Ntrk2P15209 821 aa14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cpt2P52825 658 aaKnown RBP14.66□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Drd2P61168 444 aa14.66□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms