RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 OR10G6Q8NH81 332 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 FAM76AQ8TAV0 307 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 HEXDCQ8WVB3 486 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PEX13Q92968 403 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 LRRC45Q96CN5 670 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 MTERF3Q96E29 417 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 SENP5Q96HI0 755 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 LINC00615Q96LM1 132 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 TTC25Q96NG3 672 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCNL2Q96S94 520 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 RHNO1Q9BSD3 238 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 DDA1Q9BW61 102 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 TSGA10Q9BZW7 698 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR2AG1Q9H205 316 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 MMP27Q9H306 513 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 RDH14Q9HBH5 336 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 PDE7BQ9NP56 450 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC40A1Q9NP59 571 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 ACKR4Q9NPB9 350 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 SCRT2Q9NQ03 307 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 SEPT10Q9P0V9 454 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 RHCGQ9UBD6 479 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC23A2Q9UGH3 650 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 RSPH14Q9UHP6 348 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 TFR2Q9UP52 801 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 KCNK6Q9Y257 313 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 MYO18BQ8IUG5 2567 aa3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 SMG1Q96Q15 3661 aaKnown RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 RP1L1Q8IWN7 2480 aaPredicted RBP3.25□□□□□ -1.89
CKS1BP3-201ENST00000600888 TNRC6AQ8NDV7 1962 aaKnown RBP3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 MGAT4DA6NG13 374 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR6C76A6NM76 312 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 MAGEB17A8MXT2 336 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC22A2O15244 555 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 STX7O15400 261 aaKnown RBP3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 XRCC3O43542 346 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 UGT1A9O60656 530 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 SRP72O76094 671 aaKnown RBP3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 AP2A1O95782 977 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 TPOP07202 933 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 PRSS56P0CW18 603 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCL4P13236 92 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 UGT1A6P19224 532 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 ITIH1P19827 911 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 UGT1A4P22310 534 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 PSMB4P28070 264 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 GABRA5P31644 462 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 CSTF2P33240 577 aaKnown RBP eCLIP3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 CA5AP35218 305 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 UGT1A3P35503 534 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 FDFT1P37268 417 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 ETV5P41161 510 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 PRLHRP49683 370 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF140P52738 457 aaPredicted RBP3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 ACVR1Q04771 509 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 RPA4Q13156 261 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 NFATC2Q13469 925 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 IL11RAQ14626 422 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 CHRNA6Q15825 494 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 MRGPRG-AS1Q2M3A8 158 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF876PQ49A33 203 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZNF658BQ4V348 819 aaPredicted RBP3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 FAM182AQ5T1J6 154 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 GPRC6AQ5T6X5 926 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 ARMC3Q5W041 872 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 CYB5D1Q6P9G0 228 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 FAM151BQ6UXP7 276 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 PRSS42Q7Z5A4 293 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 SNX20Q7Z614 316 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 LINC00523Q86TU6 105 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 AMZ2Q86W34 360 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 RASGEF1AQ8N9B8 481 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 PAPD5Q8NDF8 572 aaKnown RBP3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR4K2Q8NGD2 314 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR2AJ1Q8NGZ0 328 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 OR2L2Q8NH16 312 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 MOSPD2Q8NHP6 518 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 CCDC110Q8TBZ0 833 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 BLOC1S5Q8TDH9 187 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 ZFAND2BQ8WV99 257 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 ULK4Q96C45 1275 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 LGALS12Q96DT0 336 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC47A1Q96FL8 570 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 CDKN2AIPNLQ96HQ2 116 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 C9orf72Q96LT7 481 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 SGK494Q96LW2 274 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 RANBP9Q96S59 729 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 TBL1YQ9BQ87 522 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 FICDQ9BVA6 458 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 ASB8Q9H765 288 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 SYNDIG1Q9H7V2 258 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 LRRC40Q9H9A6 602 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 UGT1A7Q9HAW7 530 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 UGT1A10Q9HAW8 530 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 UGT1A8Q9HAW9 530 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 SLC52A3Q9NQ40 469 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 NLE1Q9NVX2 485 aaPredicted RBP3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 COQ3Q9NZJ6 369 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 TRIM10Q9UDY6 481 aa3.24□□□□□ -1.89
CKS1BP3-201ENST00000600888 PISDQ9UG56 409 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms