RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 RFX3P48380 749 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 AGFG1P52594 562 aaKnown RBP6.85□□□□□ -1.31
NPC1-208ENST00000590301 PRKAG1P54619 331 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 STX5Q13190 355 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 MAD2L1Q13257 205 aaPredicted RBP6.85□□□□□ -1.31
NPC1-208ENST00000590301 SMU1Q2TAY7 513 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 GRAMD1BQ3KR37 738 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 LSM12Q3MHD2 195 aaKnown RBP6.85□□□□□ -1.31
NPC1-208ENST00000590301 UGT3A2Q3SY77 523 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 GALNTL6Q49A17 601 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 ATP6AP1LQ52LC2 224 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 XKR7Q5GH72 579 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 BHLHB9Q6PI77 547 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 LUZP2Q86TE4 346 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 TGIF2LYQ8IUE0 185 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 WDR75Q8IWA0 830 aaKnown RBP6.85□□□□□ -1.31
NPC1-208ENST00000590301 UBQLNLQ8IYU4 475 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 KIRREL3Q8IZU9 778 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 GTPBP8Q8N3Z3 284 aaPredicted RBP6.85□□□□□ -1.31
NPC1-208ENST00000590301 METTL25Q8N6Q8 603 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 COX18Q8N8Q8 333 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 CNEP1R1Q8N9A8 125 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 ZNF527Q8NB42 609 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 OR56A1Q8NGH5 318 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 PSMA8Q8TAA3 256 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 FAM110BQ8TC76 370 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 OR5P2Q8WZ92 322 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 SLC9A6Q92581 669 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 NRGNQ92686 78 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 CAVIN3Q969G5 261 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 CIDECQ96AQ7 238 aaPredicted RBP6.85□□□□□ -1.31
NPC1-208ENST00000590301 MOAP1Q96BY2 351 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 STARD4Q96DR4 205 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 FAM111AQ96PZ2 611 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 STACQ99469 402 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 TMEM109Q9BVC6 243 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 BTBD2Q9BX70 525 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 HOXD1Q9GZZ0 328 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 SAP130Q9H0E3 1048 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 C12orf65Q9H3J6 166 aaKnown RBP6.85□□□□□ -1.31
NPC1-208ENST00000590301 NEUROD4Q9HD90 331 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 FANCFQ9NPI8 374 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 GLRX2Q9NS18 164 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 ZNF226Q9NYT6 803 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 EIF3LQ9Y262 564 aaKnown RBP6.85□□□□□ -1.31
NPC1-208ENST00000590301 ZNF337Q9Y3M9 751 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 PTGDR2Q9Y5Y4 395 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 ITPR3Q14573 2671 aa6.85□□□□□ -1.31
NPC1-208ENST00000590301 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 A0A1W2PRB8 838 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 GXYLT2A0PJZ3 443 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 H3BML4 177 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 H3BNH8 94 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 SCAMP2O15127 329 aaKnown RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 SEC14L5O43304 696 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 SMNDC1O75940 238 aaKnown RBP eCLIP6.84□□□□□ -1.31
NPC1-208ENST00000590301 KCNK2O95069 426 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 ATE1O95260 518 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 OXSR1O95747 527 aaPredicted RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 IGKV1D-16P01601 117 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 HRGP04196 525 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 CHRNGP07510 517 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 PABPC4LP0CB38 370 aaKnown RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 PPP3CBP16298 524 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 PRPS1L1P21108 318 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 ATP6V1C1P21283 382 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 CPOXP36551 454 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 CD79BP40259 229 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 EIF1P41567 113 aaKnown RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 KIR2DL2P43627 348 aaPredicted RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 ZNF41P51814 821 aaPredicted RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 CLDN15P56746 228 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 CLDN20P56880 219 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 C21orf58P58505 322 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 RAC1P63000 192 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 POU6F2P78424 691 aaPredicted RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 SNTB1Q13884 538 aaKnown RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 KEAP1Q14145 624 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 GUSBP1Q15486 140 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 SGCBQ16585 318 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 DUSP5Q16690 384 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 DEFB113Q30KQ7 82 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 ZNF385BQ569K4 471 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 EXOSC6Q5RKV6 272 aaKnown RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 C6orf136Q5SQH8 315 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 PDSS1Q5T2R2 415 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 CPTPQ5TA50 214 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 ANKRD26P1Q6NSI1 321 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 WDR93Q6P2C0 686 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 APOOLQ6UXV4 268 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 FAM214BQ7L5A3 538 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 SZRD1Q7Z422 152 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 MTERF4Q7Z6M4 381 aaKnown RBP6.84□□□□□ -1.31
NPC1-208ENST00000590301 SLC16A11Q8NCK7 471 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 OR4C3Q8NH37 302 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 CLHC1Q8NHS4 586 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 LINC01560Q8TB33 94 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 FNDC9Q8TBE3 224 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 SFXN5Q8TD22 340 aa6.84□□□□□ -1.31
NPC1-208ENST00000590301 TCP10LQ8TDR4 215 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms