RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 MBD3L5A6NJ08 208 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-227ENST00000590188 ALG1L2C9J202 215 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 SCDO00767 359 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 ZNF708P17019 499 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 ATP6V1C1P21283 382 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 TBXA2RP21731 343 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 CHMP24386 653 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 UQCRC1P31930 480 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 DLX5P56178 289 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 PHC1P78364 1004 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 TLE4Q04727 773 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 GANABQ14697 944 aaKnown RBP16.3■□□□□ 0.2
CIRBP-227ENST00000590188 SPANXN4Q5MJ08 99 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 DCST2Q5T1A1 773 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 NXNQ6DKJ4 435 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 OLIG3Q7RTU3 272 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 WDR75Q8IWA0 830 aaKnown RBP16.3■□□□□ 0.2
CIRBP-227ENST00000590188 DMRTC2Q8IXT2 367 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-227ENST00000590188 GCNT2Q8N0V5 402 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 ACBD4Q8NC06 268 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 MBD3L2Q8NHZ7 208 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-227ENST00000590188 SLC35G5Q96KT7 338 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 MARK4Q96L34 752 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 OR7D2Q96RA2 312 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 KLHDC3Q9BQ90 382 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 CALHM2Q9HA72 323 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 DUSP22Q9NRW4 184 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 ZNF337Q9Y3M9 751 aa16.3■□□□□ 0.2
CIRBP-227ENST00000590188 OR2M5A3KFT3 312 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 EEF1E1-BLOC1S5C9J1V9 151 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 RNASET2O00584 256 aaKnown RBP16.29■□□□□ 0.2
CIRBP-227ENST00000590188 ANKRD28O15084 1053 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 EEF1E1O43324 174 aaKnown RBP16.29■□□□□ 0.2
CIRBP-227ENST00000590188 TMIGD3P0DMS9 266 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-227ENST00000590188 IGFBP2P18065 325 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 MATN1P21941 496 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 KRTAP10-9P60411 292 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 UFM1P61960 85 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 FOXF2Q12947 444 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 CD226Q15762 336 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 AGBL2Q5U5Z8 902 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 POMZP3Q6PJE2 187 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 P4HA3Q7Z4N8 544 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 C6orf120Q7Z4R8 191 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 GRAMD2AQ8IUY3 354 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 ZNF614Q8N883 585 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 MOAP1Q96BY2 351 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 INTS12Q96CB8 462 aaKnown RBP16.29■□□□□ 0.2
CIRBP-227ENST00000590188 TEX37Q96LM6 180 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 SERHL2Q9H4I8 314 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 UBQLN4Q9NRR5 601 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 PCDHGB4Q9UN71 923 aa16.29■□□□□ 0.2
CIRBP-227ENST00000590188 PCNX3Q9H6A9 2034 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 HDAC3O15379 428 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 KRT16P08779 473 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 PEPDP12955 493 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 CTSSP25774 331 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 SSTR2P30874 369 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 SUCLG1P53597 346 aaKnown RBP16.28■□□□□ 0.2
CIRBP-227ENST00000590188 SLC18A1P54219 525 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 OCRLQ01968 901 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 MYBPHQ13203 477 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 FAM174BQ3ZCQ3 159 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 CHMP1BQ7LBR1 199 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 MEIOBQ8N635 442 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 OR8J2Q8NGG1 315 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 PHOSPHO1Q8TCT1 267 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 LURAP1Q96LR2 239 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 NPAS1Q99742 590 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 TREX2Q9BQ50 279 aaPredicted RBP16.28■□□□□ 0.2
CIRBP-227ENST00000590188 PIGQQ9BRB3 760 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 AIG1Q9NVV5 245 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 CLCF1Q9UBD9 225 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 CENPEQ02224 2701 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 CSMD1Q96PZ7 3565 aa16.28■□□□□ 0.2
CIRBP-227ENST00000590188 NUP214P35658 2090 aaPredicted RBP16.28■□□□□ 0.2
CIRBP-227ENST00000590188 INTS1Q8N201 2190 aaKnown RBP16.27■□□□□ 0.2
CIRBP-227ENST00000590188 IGLV3-32A0A0A0MS00 114 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 TRPC5OSA6NMA1 111 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 E9PBE3 544 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 OIP5O43482 229 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 SCN2BO60939 215 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 TGM6O95932 706 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 OPN1LWP04000 364 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 NGFRP08138 427 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 IL12AP29459 219 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 S100A3P33764 101 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 ASCL1P50553 236 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 CLNS1AP54105 237 aaKnown RBP16.27■□□□□ 0.2
CIRBP-227ENST00000590188 CLDN15P56746 228 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 CLDN20P56880 219 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 NDUFAF6Q330K2 333 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 FLYWCH1Q4VC44 716 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 SLC9B1Q4ZJI4 515 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 TTMPQ5BVD1 217 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 ANXA8L1Q5VT79 327 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 OGFOD2Q6N063 350 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 PPP4R4Q6NUP7 873 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 ADGRE4PQ86SQ3 457 aa16.27■□□□□ 0.2
CIRBP-227ENST00000590188 RAB3IL1Q8TBN0 382 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms