RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TNNI3P19429 210 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 DCKP27707 260 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 EFNA3P52797 238 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 NUDT6P53370 316 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 CDC42P60953 191 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 ST3GAL3Q11203 375 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 TRAM2Q15035 370 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 ZNHIT3Q15649 155 aaPredicted RBP8.72□□□□□ -1.01
LINC00838-201ENST00000562956 TRIM16LQ309B1 348 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 FLYWCH1Q4VC44 716 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 EIPR1Q53HC9 387 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 C1orf189Q5VU69 101 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 TMEM71Q6P5X7 295 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 AHSA2Q719I0 299 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 PRICKLE2Q7Z3G6 844 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 GDF7Q7Z4P5 450 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 C11orf74Q86VG3 221 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 KMT5CQ86Y97 462 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 RCBTB1Q8NDN9 531 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 TSLPQ969D9 159 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 SLC38A4Q969I6 547 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 MUL1Q969V5 352 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 MVB12AQ96EY5 273 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 SLC41A3Q96GZ6 507 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 COG8Q96MW5 612 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 OR10A5Q9H207 317 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 SERTAD3Q9UJW9 196 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 GMEB2Q9UKD1 530 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 WDFY4Q6ZS81 3184 aa8.72□□□□□ -1.01
LINC00838-201ENST00000562956 ASXL3Q9C0F0 2248 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 A0A1W2PQM1 296 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 CDHR4A6H8M9 788 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 PRKNO60260 465 aaPredicted RBP8.71□□□□□ -1.01
LINC00838-201ENST00000562956 MAN1A2O60476 641 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 PRAMEF2O60811 474 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 MT-ND2P03891 347 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 MSL3P1P0C860 447 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 CT45A8P0DMV1 189 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 CT45A9P0DMV2 189 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 PNLIPP16233 465 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 PTNP21246 168 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 HTR2AP28223 471 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 TTKP33981 857 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 MASP1P48740 699 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 CCL7P80098 99 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 SERTAD2Q14140 314 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF829Q3KNS6 432 aaPredicted RBP8.71□□□□□ -1.01
LINC00838-201ENST00000562956 CT45A2Q5DJT8 189 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 PDZK1Q5T2W1 519 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 CD300LDQ6UXZ3 194 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF730Q6ZMV8 503 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 LINC00471Q8N535 108 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF321PQ8N8H1 164 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 ZNF615Q8N8J6 731 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 PTPMT1Q8WUK0 201 aaPredicted RBP8.71□□□□□ -1.01
LINC00838-201ENST00000562956 FAR1Q8WVX9 515 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 NR4A3Q92570 626 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 POLE3Q9NRF9 147 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 PNO1Q9NRX1 252 aaKnown RBP8.71□□□□□ -1.01
LINC00838-201ENST00000562956 CNIH4Q9P003 139 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 DAPK2Q9UIK4 370 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 SLC7A7Q9UM01 511 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 PCDHGB1Q9Y5G3 927 aa8.71□□□□□ -1.01
LINC00838-201ENST00000562956 C17orf105B2RV13 164 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 RGS10O43665 173 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 ITIH1P19827 911 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 TCEA1P23193 301 aaKnown RBP8.71□□□□□ -1.02
LINC00838-201ENST00000562956 NKX2-5P52952 324 aaPredicted RBP8.71□□□□□ -1.02
LINC00838-201ENST00000562956 GP2P55259 537 aaKnown RBP8.71□□□□□ -1.02
LINC00838-201ENST00000562956 MVKQ03426 396 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 DSG2Q14126 1118 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 MINDY4Q4G0A6 757 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 VWA2Q5GFL6 755 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 PEAR1Q5VY43 1037 aaPredicted RBP8.71□□□□□ -1.02
LINC00838-201ENST00000562956 PTCHD4Q6ZW05 846 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 KIF18BQ86Y91 864 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 EID2Q8N6I1 236 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 IQCF1Q8N6M8 205 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 TMEM105Q8N8V8 129 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 TMEM255BQ8WV15 326 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 OR1F2PQ96R84 312 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 SIGLEC11Q96RL6 698 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 IL4I1Q96RQ9 567 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF304Q9HCX3 659 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 PLCXD1Q9NUJ7 323 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 PSORS1C1Q9UIG5 152 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 NINQ8N4C6 2090 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 CABIN1Q9Y6J0 2220 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 CACNA1EQ15878 2313 aa8.71□□□□□ -1.02
LINC00838-201ENST00000562956 ARID1BQ8NFD5 2236 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 IGKV3D-11A0A0A0MRZ8 115 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 A8MUA0 341 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 DSCR3O14972 297 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 OR5F1O95221 314 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 FADS2O95864 444 aaKnown RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 RPLP0P05388 317 aaKnown RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 CSNK2BP67870 215 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 COX10Q12887 443 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 RGS21Q2M5E4 152 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 SLX4IPQ5VYV7 408 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms