RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 MED11Q9P086 117 aa10.88□□□□□ -0.67
RABGGTA-218ENST00000560777 PPP4R1LQ9P1A2 415 aa10.88□□□□□ -0.67
RABGGTA-218ENST00000560777 ZNF835Q9Y2P0 537 aa10.88□□□□□ -0.67
RABGGTA-218ENST00000560777 DTNAQ9Y4J8 743 aa10.88□□□□□ -0.67
RABGGTA-218ENST00000560777 FREM3P0C091 2139 aa10.88□□□□□ -0.67
RABGGTA-218ENST00000560777 GTF3C1Q12789 2109 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 DNAJC13O75165 2243 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 IGLV3-32A0A0A0MS00 114 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 TRGV5A0A0B4J1U4 118 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 CENPVL1A0A0U1RR11 272 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 SUSD5O60279 629 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 ZIC3O60481 467 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 HCN1O60741 890 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 SHOX2O60902 331 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 TNFRSF21O75509 655 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 UGT2B17O75795 530 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 CHRM4P08173 479 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 NR2F1P10589 423 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 BMP2P12643 396 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 GPX2P18283 190 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 DSTNP60981 165 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 FADDQ13158 208 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 NFYCQ13952 458 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 MAPRE2Q15555 327 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 CD226Q15762 336 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 ZNF141Q15928 474 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 MAPK14Q16539 360 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 EIPR1Q53HC9 387 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 COQ5Q5HYK3 327 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 ARHGAP11AQ6P4F7 1023 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 LRRC74BQ6ZQY2 392 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 DHDDSQ86SQ9 333 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 TREML1Q86YW5 311 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 SPPL2CQ8IUH8 684 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 GATSQ8NAP1 163 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 ZNF527Q8NB42 609 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 FAM83FQ8NEG4 500 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 OR2M3Q8NG83 312 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 RP9Q8TA86 221 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 SLC38A5Q8WUX1 472 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 ANKRD27Q96NW4 1050 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 SLC38A1Q9H2H9 487 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 RAD21L1Q9H4I0 556 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 LDAHQ9H6V9 325 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 RUBCNLQ9H714 662 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 MTHFD2LQ9H903 347 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 THUMPD1Q9NXG2 353 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 OSGIN2Q9Y236 505 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 ARL2BPQ9Y2Y0 163 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 MRPS18CQ9Y3D5 142 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 WDR45Q9Y484 360 aa10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 FASNP49327 2511 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 HELZ2Q9BYK8 2649 aaKnown RBP10.87□□□□□ -0.67
RABGGTA-218ENST00000560777 BBIP1A8MTZ0 92 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 EVPLLA8MZ36 301 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 AQP7O14520 342 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 KIAA0513O60268 411 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 SLC19A2O60779 497 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 FAM107AO95990 144 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 NPPAP01160 153 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 STSP08842 583 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 COX4I1P13073 169 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 ENDOUP21128 410 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 PPIBP23284 216 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 SRD5A2P31213 254 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 PTGS2P35354 604 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 RNF144AP50876 292 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 DSCR4P56555 118 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 RBPJQ06330 500 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 SELPLGQ14242 412 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 CAPRIN1Q14444 709 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 TOMM20Q15388 145 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 MMEL1Q495T6 779 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 WIPI1Q5MNZ9 446 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 PDZK1Q5T2W1 519 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 REP15Q6BDI9 236 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 Q6ZPB1 254 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 MTERF4Q7Z6M4 381 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 YRDCQ86U90 279 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 MISPQ8IVT2 679 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 ZNF619Q8N2I2 560 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 POU5F2Q8N7G0 328 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 OR4K17Q8NGC6 315 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 NEIL3Q8TAT5 605 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 PHOSPHO1Q8TCT1 267 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 MAL2Q969L2 176 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 LRRC58Q96CX6 371 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 KLHDC3Q9BQ90 382 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 CPPED1Q9BRF8 314 aaPredicted RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 THUMPD3Q9BV44 507 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 TRIM8Q9BZR9 551 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 OR2B2Q9GZK3 357 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 QRSL1Q9H0R6 528 aaKnown RBP10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 SLC6A15Q9H2J7 730 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 A4GALTQ9NPC4 353 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 P2RX2Q9UBL9 471 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 TNFRSF10DQ9UBN6 386 aa10.86□□□□□ -0.67
RABGGTA-218ENST00000560777 UBR5O95071 2799 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-218ENST00000560777 SERINC4A6NH21 518 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms