RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ASB11Q8WXH4 323 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 ZNF701Q9NV72 531 aaPredicted RBP11.26□□□□□ -0.61
NEK9-210ENST00000557026 TRIM64BA6NI03 449 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 RGS11O94810 467 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 CD79AP11912 226 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 RGNQ15493 299 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 KHDC1Q4VXA5 237 aaKnown RBP11.26□□□□□ -0.61
NEK9-210ENST00000557026 C6orf141Q5SZD1 244 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 CST9Q5W186 159 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 OR5H2Q8NGV7 314 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 TOR3AQ9H497 397 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 ANKRD19PQ9H560 264 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 VNN3Q9NY84 501 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 ZNF69Q9UC07 566 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 PCDHGA3Q9Y5H0 932 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 A0A1B0GX78 115 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 POU2F2P09086 479 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 SRYQ05066 204 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 BCL2A1Q16548 175 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 MSS51Q4VC12 460 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 TRIM46Q7Z4K8 759 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 KIF18BQ86Y91 864 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 KLHDC8BQ8IXV7 354 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 FAM160A2Q8N612 972 aaPredicted RBP11.26□□□□□ -0.61
NEK9-210ENST00000557026 GPR26Q8NDV2 337 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 OR8H1Q8NGG4 311 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 ASB12Q8WXK4 309 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 INTS14Q96SY0 518 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 ULBP2Q9BZM5 246 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 LHX3Q9UBR4 397 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 RIMS3Q9UJD0 308 aa11.26□□□□□ -0.61
NEK9-210ENST00000557026 HHLA1C9JL84 531 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 H0YIV9 168 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 GPRIN2O60269 458 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 STATHP02808 62 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 FUT1P19526 365 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 AQP4P55087 323 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 NPRL3Q12980 569 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 MEF2DQ14814 521 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 CDKN3Q16667 212 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 SLC35F1Q5T1Q4 408 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 CEACAM19Q7Z692 300 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 PXKQ7Z7A4 578 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 CARFQ8N187 725 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 OR4N2Q8NGD1 307 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 PTERQ96BW5 349 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 NAV1Q8NEY1 1877 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 RGPD8O14715 1765 aaPredicted RBP11.25□□□□□ -0.61
NEK9-210ENST00000557026 GABRR3A8MPY1 467 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 GPR137BO60478 399 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 CRYABP02511 175 aaKnown RBP11.25□□□□□ -0.61
NEK9-210ENST00000557026 SLC35E2P0CK97 266 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 CDKN2DP55273 166 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 MPEG1Q2M385 716 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 TANGO2Q6ICL3 276 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 OR52E2Q8NGJ4 325 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 PAPOLGQ9BWT3 736 aaKnown RBP11.25□□□□□ -0.61
NEK9-210ENST00000557026 C1QTNF2Q9BXJ5 285 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 ZNF334Q9HCZ1 680 aaPredicted RBP11.25□□□□□ -0.61
NEK9-210ENST00000557026 TBCCD1Q9NVR7 557 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 HCFC1R1Q9NWW0 138 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 MARCH4Q9P2E8 410 aaPredicted RBP11.25□□□□□ -0.61
NEK9-210ENST00000557026 ERVK-19Q9WJR5 959 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 POLHQ9Y253 713 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 CTNSO60931 367 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 S100PP25815 95 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 SELENOWP63302 87 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 LHFPL3Q86UP9 236 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 METTL4Q8N3J2 472 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 SMOXQ9NWM0 555 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 DNAJC27Q9NZQ0 273 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 KDM3BQ7LBC6 1761 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 SMCO3A2RU48 225 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
NEK9-210ENST00000557026 SFTPCP11686 197 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 GTF2F2P13984 249 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 CERS1P27544 350 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 MAZP56270 477 aaKnown RBP11.25□□□□□ -0.61
NEK9-210ENST00000557026 REEP5Q00765 189 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 MGAT3Q09327 533 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 EML3Q32P44 896 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 TMPRSS12Q86WS5 348 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 MAFAQ8NHW3 353 aaPredicted RBP11.25□□□□□ -0.61
NEK9-210ENST00000557026 ZNF675Q8TD23 568 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 SDR39U1Q9NRG7 319 aaPredicted RBP11.25□□□□□ -0.61
NEK9-210ENST00000557026 RLIMQ9NVW2 624 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 CACFD1Q9UGQ2 172 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 HHLA2Q9UM44 414 aa11.25□□□□□ -0.61
NEK9-210ENST00000557026 ZNF264O43296 627 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 SCGB1D2O95969 90 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 FABP1P07148 127 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 PYCR1P32322 319 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 CYB561P49447 251 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 CAV3P56539 151 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 CATR1Q13166 79 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 MPP2Q14168 576 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 SPHARQ15513 63 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 C1orf220Q5T0J3 134 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 HTRA1Q92743 480 aa11.24□□□□□ -0.61
NEK9-210ENST00000557026 WDR83Q9BRX9 315 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms