RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 TUBGCP3Q96CW5 907 aa15.5■□□□□ 0.07
GPHN-211ENST00000556020 SH3YL1Q96HL8 342 aaPredicted RBP15.5■□□□□ 0.07
GPHN-211ENST00000556020 PPP1R36Q96LQ0 422 aa15.5■□□□□ 0.07
GPHN-211ENST00000556020 SIRT3Q9NTG7 399 aaPredicted RBP15.5■□□□□ 0.07
GPHN-211ENST00000556020 NTMQ9P121 344 aa15.5■□□□□ 0.07
GPHN-211ENST00000556020 ATP6V1HQ9UI12 483 aa15.5■□□□□ 0.07
GPHN-211ENST00000556020 ST6GALNAC2Q9UJ37 374 aa15.5■□□□□ 0.07
GPHN-211ENST00000556020 FAM221AA4D161 298 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 TYROBPO43914 113 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 HSPA4LO95757 839 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 HMGN2P05204 90 aaKnown RBP15.49■□□□□ 0.07
GPHN-211ENST00000556020 HPGDP15428 266 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 SERPINB5P36952 375 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 RPL3P39023 403 aaKnown RBP15.49■□□□□ 0.07
GPHN-211ENST00000556020 PRIM2P49643 509 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 RNF144AP50876 292 aaPredicted RBP15.49■□□□□ 0.07
GPHN-211ENST00000556020 POU6F2P78424 691 aaPredicted RBP15.49■□□□□ 0.07
GPHN-211ENST00000556020 TP53BP2Q13625 1128 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 LASP1Q14847 261 aaKnown RBP15.49■□□□□ 0.07
GPHN-211ENST00000556020 PON3Q15166 354 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 SGCBQ16585 318 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 WDR93Q6P2C0 686 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 OR6Y1Q8NGX8 325 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 FNDC9Q8TBE3 224 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 CDS1Q92903 461 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 CENPHQ9H3R5 247 aa15.49■□□□□ 0.07
GPHN-211ENST00000556020 MAP1AP78559 2803 aaPredicted RBP15.49■□□□□ 0.07
GPHN-211ENST00000556020 IGLV3-32A0A0A0MS00 114 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 A8MXE2 369 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 ALG1L2C9J202 215 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 LINC01387J3KSC0 135 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 EIF1AYO14602 144 aaKnown RBP15.48■□□□□ 0.07
GPHN-211ENST00000556020 RGS16O15492 202 aaPredicted RBP15.48■□□□□ 0.07
GPHN-211ENST00000556020 CFLARO15519 480 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 CTIFO43310 598 aaKnown RBP15.48■□□□□ 0.07
GPHN-211ENST00000556020 C6orf47O95873 294 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 OPN1LWP04000 364 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 TBXA2RP21731 343 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 DNASE1P24855 282 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 SERPINB4P48594 390 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 RPS3AP61247 264 aaKnown RBP15.48■□□□□ 0.07
GPHN-211ENST00000556020 EEF1A1P68104 462 aaKnown RBP15.48■□□□□ 0.07
GPHN-211ENST00000556020 PDCD2Q16342 344 aaPredicted RBP15.48■□□□□ 0.07
GPHN-211ENST00000556020 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.48■□□□□ 0.07
GPHN-211ENST00000556020 GLYR1Q49A26 553 aaPredicted RBP15.48■□□□□ 0.07
GPHN-211ENST00000556020 EEF1A1P5Q5VTE0 462 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 FAM110BQ8TC76 370 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 STARD4Q96DR4 205 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 PGM2Q96G03 612 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 BTBD2Q9BX70 525 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 OPN3Q9H1Y3 402 aaPredicted RBP15.48■□□□□ 0.07
GPHN-211ENST00000556020 ZNF395Q9H8N7 513 aaPredicted RBP15.48■□□□□ 0.07
GPHN-211ENST00000556020 ATAD3AQ9NVI7 634 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 GIN1Q9NXP7 522 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 EIF3LQ9Y262 564 aaKnown RBP15.48■□□□□ 0.07
GPHN-211ENST00000556020 AP4B1Q9Y6B7 739 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 ITPR3Q14573 2671 aa15.48■□□□□ 0.07
GPHN-211ENST00000556020 NUP214P35658 2090 aaPredicted RBP15.47■□□□□ 0.07
GPHN-211ENST00000556020 NPIPA5A0A0B4J1W7 369 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 SH3D21A4FU49 640 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 NPIPA7E9PJI5 369 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 SCDO00767 359 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 ITM2AO43736 263 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 TNFRSF21O75509 655 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 NPIPA8P0DM63 369 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 ETV4P43268 484 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 EIF1AXP47813 144 aaKnown RBP15.47■□□□□ 0.07
GPHN-211ENST00000556020 CCT3P49368 545 aaKnown RBP15.47■□□□□ 0.07
GPHN-211ENST00000556020 ZNF41P51814 821 aaPredicted RBP15.47■□□□□ 0.07
GPHN-211ENST00000556020 ZNF844Q08AG5 666 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 FAM27E3Q08E93 113 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 MLC1Q15049 377 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 CHI3L2Q15782 390 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 PGS1Q32NB8 556 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 ZCCHC12Q6PEW1 402 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 BTLAQ7Z6A9 289 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 OR5AK3PQ8NH89 298 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 OR5P2Q8WZ92 322 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 NINJ1Q92982 152 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 PRPF18Q99633 342 aaKnown RBP15.47■□□□□ 0.07
GPHN-211ENST00000556020 NPAS1Q99742 590 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 TMEM109Q9BVC6 243 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 PRRG4Q9BZD6 226 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 TMEM185BQ9H7F4 350 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 CXorf36Q9H7Y0 433 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 UBQLN4Q9NRR5 601 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 EDARQ9UNE0 448 aa15.47■□□□□ 0.07
GPHN-211ENST00000556020 UQCRHLA0A096LP55 91 aa15.46■□□□□ 0.07
GPHN-211ENST00000556020 MSTNO14793 375 aa15.46■□□□□ 0.07
GPHN-211ENST00000556020 CASKO14936 926 aa15.46■□□□□ 0.07
GPHN-211ENST00000556020 CRHP06850 196 aa15.46■□□□□ 0.07
GPHN-211ENST00000556020 NGFRP08138 427 aa15.46■□□□□ 0.07
GPHN-211ENST00000556020 G6PDP11413 515 aa15.46■□□□□ 0.07
GPHN-211ENST00000556020 ATP6V1C1P21283 382 aa15.46■□□□□ 0.07
GPHN-211ENST00000556020 SOAT1P35610 550 aa15.46■□□□□ 0.07
GPHN-211ENST00000556020 KIR2DL2P43627 348 aaPredicted RBP15.46■□□□□ 0.07
GPHN-211ENST00000556020 KCNJ5P48544 419 aa15.46■□□□□ 0.07
GPHN-211ENST00000556020 LSM12Q3MHD2 195 aaKnown RBP15.46■□□□□ 0.07
GPHN-211ENST00000556020 GGNQ86UU5 652 aa15.46■□□□□ 0.07
GPHN-211ENST00000556020 MREGQ8N565 214 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms