RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 NKX2-2O95096 273 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 ANGPTL1O95841 491 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 ACP2P11117 423 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 PRPS2P11908 318 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 ARRB2P32121 409 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 GPC1P35052 558 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 KIR2DL2P43627 348 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-206ENST00000543881 PRKAG1P54619 331 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 RPL38P63173 70 aaKnown RBP10.67□□□□□ -0.7
GABPB1-206ENST00000543881 PRR5P85299 388 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 GANABQ14697 944 aaKnown RBP10.67□□□□□ -0.7
GABPB1-206ENST00000543881 TMEM44Q2T9K0 475 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 BTLAQ7Z6A9 289 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 TRABD2AQ86V40 505 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 SLC16A11Q8NCK7 471 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 NUP43Q8NFH3 380 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 OR4C3Q8NH37 302 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 FBXO30Q8TB52 745 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 GPR151Q8TDV0 419 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 PPCDCQ96CD2 204 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 APOPT1Q96IL0 206 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 ZNF845Q96IR2 970 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-206ENST00000543881 WFIKKN1Q96NZ8 548 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 NPAS1Q99742 590 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 KLHDC3Q9BQ90 382 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 TRMOQ9BU70 441 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 GSX2Q9BZM3 304 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 FBXO34Q9NWN3 711 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 KLHL28Q9NXS3 571 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 ZNF226Q9NYT6 803 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 SH3BP4Q9P0V3 963 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 NTMQ9P121 344 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 GIMAP2Q9UG22 337 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 RAI1Q7Z5J4 1906 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-206ENST00000543881 SLC22A20A6NK97 555 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 H3BML4 177 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 MSTNO14793 375 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 PIP5K1BO14986 540 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 SEC14L5O43304 696 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 TNFRSF21O75509 655 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 FGF4P08620 206 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 NEFHP12036 1026 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 BCKDHAP12694 445 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 PTH2RP49190 550 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 FAM27E3Q08E93 113 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 C17orf67Q0P5P2 114 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 GALNTL6Q49A17 601 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 ARL13AQ5H913 290 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-206ENST00000543881 ZNF474Q6S9Z5 364 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-206ENST00000543881 C20orf204Q6ZNR8 217 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 P4HA3Q7Z4N8 544 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 PHC2Q8IXK0 858 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 MEIOBQ8N635 442 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 FNDC9Q8TBE3 224 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 FAM110BQ8TC76 370 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 TWIST2Q8WVJ9 160 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 SLC9A6Q92581 669 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 OTUB1Q96FW1 271 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-206ENST00000543881 C16orf58Q96GQ5 468 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 FAM111AQ96PZ2 611 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 PINK1Q9BXM7 581 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 TBL1XR1Q9BZK7 514 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 PTGES2Q9H7Z7 377 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 SIRT3Q9NTG7 399 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-206ENST00000543881 ACSS1Q9NUB1 689 aaPredicted RBP10.66□□□□□ -0.7
GABPB1-206ENST00000543881 MID2Q9UJV3 735 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 MRTO4Q9UKD2 239 aaKnown RBP10.66□□□□□ -0.7
GABPB1-206ENST00000543881 TRAF6Q9Y4K3 522 aa10.66□□□□□ -0.7
GABPB1-206ENST00000543881 MXRA5Q9NR99 2828 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 TTC36A6NLP5 189 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 ALG1L2C9J202 215 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 NPHS1O60500 1241 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 SPAG7O75391 227 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 SMNDC1O75940 238 aaKnown RBP eCLIP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 KCNK2O95069 426 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 KCNH1O95259 989 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 OXSR1O95747 527 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 CGAP01215 116 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 CRHP06850 196 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 CREB1P16220 341 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 CRYGSP22914 178 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 CLK3P49761 638 aaKnown RBP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 PSMD4P55036 377 aaKnown RBP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 MANFP55145 182 aaKnown RBP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 VSNL1P62760 191 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 EEF1A1P68104 462 aaKnown RBP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 SIRPAP78324 504 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 GUSBP1Q15486 140 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 DUSP5Q16690 384 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 GLYR1Q49A26 553 aaPredicted RBP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 EXOSC6Q5RKV6 272 aaKnown RBP10.65□□□□□ -0.7
GABPB1-206ENST00000543881 EEF1A1P5Q5VTE0 462 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 OR2A2Q6IF42 318 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 HMBOX1Q6NT76 420 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 MFSD12Q6NUT3 480 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 FIGNL1Q6PIW4 674 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 ZCCHC23Q6ZST2 131 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 CHMP1BQ7LBR1 199 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 GGNQ86UU5 652 aa10.65□□□□□ -0.7
GABPB1-206ENST00000543881 DDIASQ8IXT1 998 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms