RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 SEC31AO94979 1220 aaKnown RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 SIX3O95343 332 aaPredicted RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 NTN1O95631 604 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 FABP6P51161 128 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 ZNF41P51814 821 aaPredicted RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 EFNA4P52798 201 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 GALNT1Q10472 559 aaPredicted RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 CSTF3Q12996 717 aaKnown RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 GGTLC2Q14390 218 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 TCHHL1Q5QJ38 904 aaPredicted RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 CPTPQ5TA50 214 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 SLC22A25Q6T423 547 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 TMEM108Q6UXF1 575 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 C3orf62Q6ZUJ4 267 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 CYS1Q717R9 158 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 NUFIP2Q7Z417 695 aaKnown RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 CCDC91Q7Z6B0 441 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 TDRPQ86YL5 185 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 TUSC5Q8IXB3 177 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 GTPBP8Q8N3Z3 284 aaPredicted RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 CDYL2Q8N8U2 506 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 KCTD4Q8WVF5 259 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 SELENOMQ8WWX9 145 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 EXOSC8Q96B26 276 aaKnown RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 ZMYND19Q96E35 227 aaPredicted RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 HBEGFQ99075 208 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 TMEM185BQ9H7F4 350 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 BRF2Q9HAW0 419 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 C3orf14Q9HBI5 128 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 EML4Q9HC35 981 aaKnown RBP11.14□□□□□ -0.63
DDX41-215ENST00000512431 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 KLHL13Q9P2N7 655 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 NFU1Q9UMS0 254 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 SNX6Q9UNH7 406 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 PMF1-BGLAPU3KQ54 211 aa11.14□□□□□ -0.63
DDX41-215ENST00000512431 A0A0J9YW62 118 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 TCRBV9S1A1TA0A576 114 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 FAM159BA6NKW6 160 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 H7C417 338 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 PRKD3O94806 890 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 UTS2O95399 124 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 IL33O95760 270 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 TGFAP01135 160 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 YES1P07947 543 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 APEHP13798 732 aaKnown RBP11.13□□□□□ -0.63
DDX41-215ENST00000512431 PRR5P85299 388 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 CHRNB3Q05901 458 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 HEPACAMQ14CZ8 416 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 ZNF239Q16600 458 aaKnown RBP11.13□□□□□ -0.63
DDX41-215ENST00000512431 TIMM23BQ5SRD1 257 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 C11orf71Q6IPW1 123 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 Q6ZSR9 355 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 P2RY8Q86VZ1 359 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 KLHL7Q8IXQ5 586 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 LILRA2Q8N149 483 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 C1orf52Q8N6N3 182 aaKnown RBP11.13□□□□□ -0.63
DDX41-215ENST00000512431 PPM1NQ8N819 430 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 OR7G2Q8NG99 324 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 SGMS2Q8NHU3 365 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 RNF128Q8TEB7 428 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 ABHD3Q8WU67 409 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 SLC9A6Q92581 669 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 CPNE4Q96A23 557 aaPredicted RBP11.13□□□□□ -0.63
DDX41-215ENST00000512431 MSI2Q96DH6 328 aaKnown RBP11.13□□□□□ -0.63
DDX41-215ENST00000512431 KLHL15Q96M94 604 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 RNF145Q96MT1 663 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 BBS4Q96RK4 519 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 ADAM19Q9H013 955 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 SLC35C2Q9NQQ7 365 aa11.13□□□□□ -0.63
DDX41-215ENST00000512431 C7orf72A4D263 438 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 E7EQL1 145 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 LYZL6O75951 148 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 KCNH1O95259 989 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 PDYNP01213 254 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 IL3P08700 152 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 DHRS4L1P0CG22 281 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 ITGA2P17301 1181 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 GGT1P19440 569 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 SRP14P37108 136 aaKnown RBP11.12□□□□□ -0.63
DDX41-215ENST00000512431 KLHL17Q6TDP4 642 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 SEZ6L2Q6UXD5 910 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 Q6ZT83 130 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 TRABD2AQ86V40 505 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 PTGR2Q8N8N7 351 aaPredicted RBP11.12□□□□□ -0.63
DDX41-215ENST00000512431 OR4F6Q8NGB9 312 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 C3orf49Q96BT1 292 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 PHF21BQ96EK2 531 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 PIMREGQ9BSJ6 248 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 SHCBP1LQ9BZQ2 653 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 FARSBQ9NSD9 589 aaKnown RBP11.12□□□□□ -0.63
DDX41-215ENST00000512431 VPS29Q9UBQ0 182 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 MCM8Q9UJA3 840 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 SNX12Q9UMY4 172 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 PPP2R2CQ9Y2T4 447 aa11.12□□□□□ -0.63
DDX41-215ENST00000512431 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.11□□□□□ -0.632e-7■■■■■ 29.5
DDX41-215ENST00000512431 A0A087WV62 115 aa11.11□□□□□ -0.63
DDX41-215ENST00000512431 GNG14A0A1W2PPG7 69 aa11.11□□□□□ -0.63
DDX41-215ENST00000512431 A0A1W2PRB8 838 aa11.11□□□□□ -0.63
DDX41-215ENST00000512431 ESYT3A0FGR9 886 aa11.11□□□□□ -0.63
DDX41-215ENST00000512431 GJE1A6NN92 205 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms