RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 C3P1Q6ZMU1 363 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 IDO2Q6ZQW0 420 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 TOM1L2Q6ZVM7 507 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 Q6ZVQ6 151 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 CYP4V2Q6ZWL3 525 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MIER3Q7Z3K6 550 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 DND1Q8IYX4 353 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 CENPSQ8N2Z9 138 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 FBXW8Q8N3Y1 598 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 HDDC3Q8N4P3 179 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MAPK1IP1LQ8NDC0 245 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 CATSPER1Q8NEC5 780 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PRSS33Q8NF86 280 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 OR52E1Q8NGJ3 308 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 OR5M9Q8NGP3 310 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 OR13C5Q8NGS8 318 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF420Q8TAQ5 688 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 ST7LQ8TDW4 575 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM172AQ8WUF8 416 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 C10orf82Q8WW14 230 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 ESR2Q92731 530 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 CCDC127Q96BQ5 260 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 BPIFA2Q96DR5 249 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PLEKHA8Q96JA3 519 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 RPRD1AQ96P16 312 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 ATOH8Q96SQ7 321 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 FMO2Q99518 471 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 DOK1Q99704 481 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 DDX50Q9BQ39 737 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 SELENOSQ9BQE4 189 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM213AQ9BRX8 229 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MROQ9BYG7 248 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 NEUROG2Q9H2A3 272 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 EHD1Q9H4M9 534 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MARCH7Q9H992 704 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 KCNK13Q9HB14 408 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 FANCFQ9NPI8 374 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 DNAJC11Q9NVH1 559 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PAK5Q9P286 719 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 ANKMY1Q9P2S6 941 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 IL19Q9UHD0 177 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 KIAA1257Q9ULG3 409 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 DUSP12Q9UNI6 340 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 EXOC7Q9UPT5 735 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 TRAF3IP3Q9Y228 551 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 ERGIC3Q9Y282 383 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 MYO5AQ9Y4I1 1855 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 COL22A1Q8NFW1 1626 aaPredicted RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PHRF1Q9P1Y6 1649 aaKnown RBP3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 METP08581 1390 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PALLDQ8WX93 1383 aa3.21□□□□□ -1.9
ECHDC1-217ENST00000488087 PPLO60437 1756 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 C10orf71Q711Q0 1435 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 C4AP0C0L4 1744 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 C4BP0C0L5 1744 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 C15orf38-AP3S2A0A0A6YYH1 394 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 TRBV2A0A0J9YWF9 115 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 TMEM120BA0PK00 339 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 OR5K4A6NMS3 321 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 A8MXK9 166 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 H0YIG0 161 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 CCSO14618 274 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 RASGRF2O14827 1237 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 POLR2DO15514 142 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 RIPK2O43353 540 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 SYT7O43581 403 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 EDF1O60869 148 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 SPAG7O75391 227 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF254O75437 659 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 TM7SF2O76062 418 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 OR6B1O95007 311 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 NXPH4O95158 308 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 POP4O95707 220 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ALPPP05187 535 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ALPPL2P10696 532 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF10P21506 573 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 CFL1P23528 166 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ACKR3P25106 362 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 PBLDP30039 288 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ATXN3P54252 364 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 C21orf59P57076 290 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 GNG2P59768 71 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 DSTNP60981 165 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 SRP54P61011 504 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 TRA2BP62995 288 aaKnown RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 GPR50Q13585 617 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 RAPSNQ13702 412 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ENPP2Q13822 863 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 CYTH1Q15438 398 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC15A2Q16348 729 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 PDK4Q16654 411 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 KLHL38Q2WGJ6 581 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 OGFRL1Q5TC84 451 aaPredicted RBP3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 B3GLCTQ6Y288 498 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 STOX1Q6ZVD7 989 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 CENPUQ71F23 418 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 ARPINQ7Z6K5 226 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 DHDDSQ86SQ9 333 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 GTSCR1Q86UQ5 136 aa3.2□□□□□ -1.9
ECHDC1-217ENST00000488087 LRRC6Q86X45 466 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms