RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ZNF106Q9H2Y7 1883 aaKnown RBP12.96□□□□□ -0.33
HDAC1-206ENST00000476391 BPIFA1Q9NP55 256 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 GHRLQ9UBU3 117 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 NPFFR2Q9Y5X5 522 aa12.96□□□□□ -0.33
HDAC1-206ENST00000476391 PLXNA4Q9HCM2 1894 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 C19orf81C9J6K1 198 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 AKR7A3O95154 331 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 CXCL14O95715 111 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 PAK4O96013 591 aaPredicted RBP12.96□□□□□ -0.34
HDAC1-206ENST00000476391 TYRP1P17643 537 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 ADCYAP1P18509 176 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 OR10A3P58181 314 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 UBE2IP63279 158 aaKnown RBP12.96□□□□□ -0.34
HDAC1-206ENST00000476391 HBA1P69905 142 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 KCNA10Q16322 511 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 CDNFQ49AH0 187 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 GPRC6AQ5T6X5 926 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 ADNP2Q6IQ32 1131 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 C3orf33Q6P1S2 294 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF322Q6U7Q0 402 aaPredicted RBP12.96□□□□□ -0.34
HDAC1-206ENST00000476391 KLBQ86Z14 1044 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 LINC00471Q8N535 108 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 ZBTB2Q8N680 514 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 CXorf40BQ96DE9 158 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 BHLHE41Q9C0J9 482 aaPredicted RBP12.96□□□□□ -0.34
HDAC1-206ENST00000476391 ABRACLQ9P1F3 81 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 METTL1Q9UBP6 276 aaKnown RBP12.96□□□□□ -0.34
HDAC1-206ENST00000476391 ACAD8Q9UKU7 415 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 RCE1Q9Y256 329 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 PLEKHA6Q9Y2H5 1048 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 PCDHB9Q9Y5E1 797 aa12.96□□□□□ -0.34
HDAC1-206ENST00000476391 EP400Q96L91 3159 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 GSAPA4D1B5 854 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 GFYI3L273 518 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 SLC25A14O95258 325 aaPredicted RBP12.95□□□□□ -0.34
HDAC1-206ENST00000476391 RPL3P39023 403 aaKnown RBP12.95□□□□□ -0.34
HDAC1-206ENST00000476391 OPRD1P41143 372 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 SREBF2Q12772 1141 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 DUSP4Q13115 394 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF791Q3KP31 576 aaPredicted RBP12.95□□□□□ -0.34
HDAC1-206ENST00000476391 MS4A13Q5J8X5 152 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 LINGO4Q6UY18 593 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 SLC7A13Q8TCU3 470 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 PIGKQ92643 395 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 PHYHIPLQ96FC7 376 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 PEX11GQ96HA9 241 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 WRAP53Q9BUR4 548 aaKnown RBP12.95□□□□□ -0.34
HDAC1-206ENST00000476391 JAM3Q9BX67 310 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 PBX4Q9BYU1 374 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 PDFQ9HBH1 243 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 TCF7L1Q9HCS4 588 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 ARL15Q9NXU5 204 aa12.95□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF629Q9UEG4 869 aaPredicted RBP12.95□□□□□ -0.34
HDAC1-206ENST00000476391 EXOGQ9Y2C4 368 aaKnown RBP12.95□□□□□ -0.34
HDAC1-206ENST00000476391 F5H5P2 479 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 CD53P19397 219 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 PAX6P26367 422 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 EIF2S3P41091 472 aaKnown RBP12.94□□□□□ -0.34
HDAC1-206ENST00000476391 RPIAP49247 311 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 FNTBP49356 437 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 CDH11P55287 796 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 DEFA6Q01524 100 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 RBMS2Q15434 407 aaKnown RBP12.94□□□□□ -0.34
HDAC1-206ENST00000476391 TRAM1Q15629 374 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 OR2B11Q5JQS5 317 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 EID2Q8N6I1 236 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 OR4F15Q8NGB8 312 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 SCAMP5Q8TAC9 235 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 QRSL1Q9H0R6 528 aaKnown RBP12.94□□□□□ -0.34
HDAC1-206ENST00000476391 IRAK3Q9Y616 596 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 ABHD14A-ACY1A0A1B0GW23 586 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 UBE2QL1A1L167 161 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 IMPA2O14732 288 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 KHDRBS3O75525 346 aaKnown RBP12.94□□□□□ -0.34
HDAC1-206ENST00000476391 REM1O75628 298 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 EPHX1P07099 455 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 ZDHHC11BP0C7U3 371 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 PCSK1P29120 753 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 ACVRL1P37023 503 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 SLC6A11P48066 632 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 REEP3Q6NUK4 255 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 CDC73Q6P1J9 531 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF783Q6ZMS7 281 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 MISPQ8IVT2 679 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 CFAP206Q8IYR0 622 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 LKAAEAR1Q8TD35 194 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 EXOSC8Q96B26 276 aaKnown RBP12.94□□□□□ -0.34
HDAC1-206ENST00000476391 ADAT1Q9BUB4 502 aaKnown RBP12.94□□□□□ -0.34
HDAC1-206ENST00000476391 AUNIPQ9H7T9 357 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 TREM2Q9NZC2 230 aa12.94□□□□□ -0.34
HDAC1-206ENST00000476391 A0A0D9SG52 128 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 C1orf196B1AJZ1 125 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 GPR39O43194 453 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 LGALS2P05162 132 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 KLK3P07288 261 aaPredicted RBP12.93□□□□□ -0.34
HDAC1-206ENST00000476391 GSTM3P21266 225 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 MMP11P24347 488 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 HTR2AP28223 471 aa12.93□□□□□ -0.34
HDAC1-206ENST00000476391 NOS3P29474 1203 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms