RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 RAPGEF5Q92565 580 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 RRNAD1Q96FB5 475 aaKnown RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 DCUN1D1Q96GG9 259 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 HARBI1Q96MB7 349 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 NSMCE3Q96MG7 304 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 OLFM3Q96PB7 478 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 TGM7Q96PF1 710 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 RANBP9Q96S59 729 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 SMC6Q96SB8 1091 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 CGREF1Q99674 301 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 C19orf43Q9BQ61 176 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 C17orf62Q9BQA9 187 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 TUBB2BQ9BVA1 445 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 TBC1D10AQ9BXI6 508 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 RAB33BQ9H082 229 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 NHEJ1Q9H9Q4 299 aaPredicted RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 TMEM165Q9HC07 324 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 SYTL2Q9HCH5 934 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 KLHL8Q9P2G9 620 aaPredicted RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ZNF624Q9P2J8 865 aaPredicted RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ATXN10Q9UBB4 475 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 LNPEPQ9UIQ6 1025 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 RARRES3Q9UL19 164 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 MKLN1Q9UL63 735 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 COLEC10Q9Y6Z7 277 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 PKD1L1Q8TDX9 2849 aa3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
GTF3C3-207ENST00000451088 SPTBP11277 2137 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 CCDC88CQ9P219 2028 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 GLYATL1P3A0A0U1RQE8 302 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 LOC285095A0A1B0GVY8 99 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 C5orf60A6NFR6 353 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 TLCD2A6NGC4 264 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 HS3ST1O14792 307 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 STX7O15400 261 aaKnown RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 CST8O60676 142 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 PAGE4O60829 102 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 POP7O75817 140 aaKnown RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 IGHEP01854 428 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 KLK3P07288 261 aaPredicted RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 SLC35G4P0C7Q5 338 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 NELFEP18615 380 aaKnown RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 MSH3P20585 1137 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 PTPN3P26045 913 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 HADHAP40939 763 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 GEMP55040 296 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 HADHBP55084 474 aaKnown RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 TAS2R40P59535 323 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 DYNLT1P63172 113 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 CTAG1AP78358 180 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 PLOD1Q02809 727 aaPredicted RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 ACTN3Q08043 901 aaPredicted RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 XRCC4Q13426 336 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 RIPK1Q13546 671 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 SLC1A5Q15758 541 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 ASTE1Q2TB18 679 aaPredicted RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 CDONQ4KMG0 1287 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 TFDP3Q5H9I0 405 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 WDR38Q5JTN6 314 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 SARM1Q6SZW1 724 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 RFLNAQ6ZTI6 216 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 NCCRP1Q6ZVX7 275 aaPredicted RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 PLEKHM3Q6ZWE6 761 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 PID1Q7Z2X4 250 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 PCGF5Q86SE9 256 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 HOOK3Q86VS8 718 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 OOSP2Q86WS3 158 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 ARMC8Q8IUR7 673 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 KATNAL2Q8IYT4 538 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 TTC30BQ8N4P2 665 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 SIDT2Q8NBJ9 832 aaKnown RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 SPC24Q8NBT2 197 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 GPR26Q8NDV2 337 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 DDHD1Q8NEL9 900 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 OR14L1PQ8NHC6 308 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 BLOC1S5Q8TDH9 187 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 ACMSDQ8TDX5 336 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 SLC44A1Q8WWI5 657 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 TM9SF4Q92544 642 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 TADA1Q96BN2 335 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 ULK4Q96C45 1275 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 IP6K3Q96PC2 410 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 OR6C1Q96RD1 312 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 TRIB3Q96RU7 358 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 CTRCQ99895 268 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 SLC39A3Q9BRY0 314 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 CCM2Q9BSQ5 444 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 CAPS2Q9BXY5 557 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 EGLN1Q9GZT9 426 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 PAIP1Q9H074 479 aaKnown RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 CCDC68Q9H2F9 335 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 IL26Q9NPH9 171 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 PCDHB16Q9NRJ7 776 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 ASF1BQ9NVP2 202 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 SMOXQ9NWM0 555 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 TMEM9Q9P0T7 183 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 MARCH4Q9P2E8 410 aaPredicted RBP3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 COPG2Q9UBF2 871 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 NENFQ9UMX5 172 aa3.8□□□□□ -1.8
GTF3C3-207ENST00000451088 CAMK2AQ9UQM7 478 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms