RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CDC123O75794 336 aaPredicted RBP14□□□□□ -0.17
SCAF11-204ENST00000395454 UGT2B17O75795 530 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 SEC14L2O76054 403 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 CBX7O95931 251 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 GASTP01350 101 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 GABRB1P18505 474 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 S1PR1P21453 382 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 SH3BGRP55822 239 aaPredicted RBP14□□□□□ -0.17
SCAF11-204ENST00000395454 HPCAP84074 193 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 IL1RL1Q01638 556 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 PMS2P3Q13401 168 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 TUBA3CQ13748 450 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 RAB39AQ14964 217 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF311Q5JNZ3 666 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 DCST1Q5T197 706 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 KLHL17Q6TDP4 642 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 COX15Q7KZN9 410 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 NLGN4XQ8N0W4 816 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 NLGN4YQ8NFZ3 816 aaPredicted RBP14□□□□□ -0.17
SCAF11-204ENST00000395454 OR13F1Q8NGS4 319 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 RHOXF1Q8NHV9 184 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF420Q8TAQ5 688 aaPredicted RBP14□□□□□ -0.17
SCAF11-204ENST00000395454 ZG16BQ96DA0 208 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 SPRY4Q9C004 299 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 QRSL1Q9H0R6 528 aaKnown RBP14□□□□□ -0.17
SCAF11-204ENST00000395454 CXorf21Q9HAI6 301 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 POLE3Q9NRF9 147 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 SLC22A11Q9NSA0 550 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 PLCXD1Q9NUJ7 323 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 WDR70Q9NW82 654 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 CTSFQ9UBX1 484 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 REV1Q9UBZ9 1251 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 RSL24D1Q9UHA3 163 aaKnown RBP14□□□□□ -0.17
SCAF11-204ENST00000395454 MRPS33Q9Y291 106 aaKnown RBP14□□□□□ -0.17
SCAF11-204ENST00000395454 LOC400499M0QZD8 3231 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 ZAR1LA6NP61 321 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 TGFBR3LH3BV60 316 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 KIAA0513O60268 411 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 NKX2-2O95096 273 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 ALOX5P09917 674 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 CT62P0C5K7 136 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 NT5EP21589 574 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 PCMT1P22061 227 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 CD82P27701 267 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 DCKP27707 260 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 GALNSP34059 522 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 VWA2Q5GFL6 755 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 PGBD2Q6P3X8 592 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF517Q6ZMY9 492 aaPredicted RBP14□□□□□ -0.17
SCAF11-204ENST00000395454 ESX1Q8N693 406 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 MORN4Q8NDC4 146 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 SGCDQ92629 289 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 DIO2Q92813 273 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 LMF2Q9BU23 707 aaKnown RBP14□□□□□ -0.17
SCAF11-204ENST00000395454 VCX3AQ9NNX9 186 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 CCNB1IP1Q9NPC3 277 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 RNF6Q9Y252 685 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 TPRKBQ9Y3C4 175 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 WDR45Q9Y484 360 aa14□□□□□ -0.17
SCAF11-204ENST00000395454 NUP210LQ5VU65 1888 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 C9J4A7 227 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 COQ9O75208 318 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 EEF1B2P24534 225 aaKnown RBP13.99□□□□□ -0.17
SCAF11-204ENST00000395454 KRT20P35900 424 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 HSD17B7P56937 341 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 OCA2Q04671 838 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 PIN1Q13526 163 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-204ENST00000395454 ERV3-1Q14264 604 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 MFSD4BQ5TF39 518 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 B3GNT6Q6ZMB0 384 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 WDR53Q7Z5U6 358 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-204ENST00000395454 VRK2Q86Y07 508 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 PRSS58Q8IYP2 241 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 DEPDC4Q8N2C3 294 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 VWA5B2Q8N398 1253 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 OR52P1PQ8NH57 321 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 SLC9A6Q92581 669 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF578Q96N58 590 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-204ENST00000395454 NODALQ96S42 347 aa13.99□□□□□ -0.17
SCAF11-204ENST00000395454 MKKSQ9NPJ1 570 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-204ENST00000395454 GPN3Q9UHW5 284 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF443Q9Y2A4 671 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-204ENST00000395454 AHCYL1O43865 530 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 RAD1O60671 282 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 TPST2O60704 377 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 NME6O75414 186 aaPredicted RBP13.98□□□□□ -0.17
SCAF11-204ENST00000395454 TCN2P20062 427 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 FOXL2P58012 376 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 EEF1A1P68104 462 aaKnown RBP13.98□□□□□ -0.17
SCAF11-204ENST00000395454 ALDH6A1Q02252 535 aaKnown RBP13.98□□□□□ -0.17
SCAF11-204ENST00000395454 MINDY4Q4G0A6 757 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 FGD3Q5JSP0 725 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 DCST2Q5T1A1 773 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 DGAT2L6Q6ZPD8 337 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 SHISA6Q6ZSJ9 500 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 PEX5LQ8IYB4 626 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 ZNF619Q8N2I2 560 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 IL22RA1Q8N6P7 574 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 BPIFB6Q8NFQ5 453 aa13.98□□□□□ -0.17
SCAF11-204ENST00000395454 STT3BQ8TCJ2 826 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms