RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 ABCG4Q9H172 646 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 NUDT15Q9NV35 164 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 TAS2R3Q9NYW6 316 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 C5AR2Q9P296 337 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 MBD2Q9UBB5 411 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 TRPC4Q9UBN4 977 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 TDRD6O60522 2096 aaKnown RBP8.54□□□□□ -1.04
TOP1-201ENST00000361337 A0A1W2PPK0 400 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 FEZF1A0PJY2 475 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 DISC1C4P0D8 188 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 OR12D1P0DN82 309 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 PIPP12273 146 aaPredicted RBP8.54□□□□□ -1.04
TOP1-201ENST00000361337 TIA1P31483 386 aaKnown RBP eCLIP8.54□□□□□ -1.042e-8■■■■□ 19.8
TOP1-201ENST00000361337 TMEM88Q6PEY1 159 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 CNIH2Q6PI25 160 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 UNC5DQ6UXZ4 953 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 IDO2Q6ZQW0 420 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 COMMD6Q7Z4G1 85 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 TECPR1Q7Z6L1 1165 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 C17orf64Q86WR6 236 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 PLCZ1Q86YW0 608 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 METTL27Q8N6F8 245 aaPredicted RBP8.54□□□□□ -1.04
TOP1-201ENST00000361337 KCT2Q8NC54 265 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 ZNF740Q8NDX6 193 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 OR52I1Q8NGK6 324 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 SENP5Q96HI0 755 aaPredicted RBP8.54□□□□□ -1.04
TOP1-201ENST00000361337 TSNAXQ99598 290 aaKnown RBP8.54□□□□□ -1.04
TOP1-201ENST00000361337 CDCA3Q99618 268 aaPredicted RBP8.54□□□□□ -1.04
TOP1-201ENST00000361337 MND1Q9BWT6 205 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 POT1Q9NUX5 634 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 GPR52Q9Y2T5 361 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 HRH3Q9Y5N1 445 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 LOC100509620A0A075B734 347 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 CPSF4LA6NMK7 179 aaKnown RBP8.54□□□□□ -1.04
TOP1-201ENST00000361337 EEF1E1O43324 174 aaKnown RBP8.54□□□□□ -1.04
TOP1-201ENST00000361337 GMDSO60547 372 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 LALBAP00709 142 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 IFNW1P05000 195 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 BCHEP06276 602 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 FAM157BP0CG42 384 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 F8A1P23610 371 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 ELAVL4P26378 380 aaKnown RBP8.54□□□□□ -1.04
TOP1-201ENST00000361337 STOMP27105 288 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 C21orf58P58505 322 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 TAS2R50P59544 299 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 C19orf57Q0VDD7 668 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 TMEM196Q5HYL7 178 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 CRB2Q5IJ48 1285 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 C9orf64Q5T6V5 341 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 TCTN3Q6NUS6 607 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 LRRN1Q6UXK5 716 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 LAPTM4BQ86VI4 370 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 OR5J2Q8NH18 312 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.54□□□□□ -1.041e-15■■□□□ 12
TOP1-201ENST00000361337 NANPQ8TBE9 248 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 APOBEC4Q8WW27 367 aaKnown RBP8.54□□□□□ -1.04
TOP1-201ENST00000361337 PATE1Q8WXA2 126 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 SPACA7Q96KW9 195 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 FAM83CQ9BQN1 747 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 SLC6A15Q9H2J7 730 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 CPNE7Q9UBL6 633 aa8.54□□□□□ -1.04
TOP1-201ENST00000361337 OSMP13725 252 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 ZNF30P17039 623 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 RHCEP18577 417 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 PVALBP20472 110 aaPredicted RBP8.53□□□□□ -1.04
TOP1-201ENST00000361337 ENPP1P22413 925 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 TPMTP51580 245 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 XKP51811 444 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 FABP5Q01469 135 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 TARDBPQ13148 414 aaKnown RBP eCLIP8.53□□□□□ -1.047e-7■■■■□ 23
TOP1-201ENST00000361337 PIN1Q13526 163 aaPredicted RBP8.53□□□□□ -1.04
TOP1-201ENST00000361337 SLBPQ14493 270 aaKnown RBP eCLIP8.53□□□□□ -1.04
TOP1-201ENST00000361337 ZNF628Q5EBL2 1059 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 ANXA8L1Q5VT79 327 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 LYPLAL1Q5VWZ2 237 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 ACSM5Q6NUN0 579 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 CAMKMTQ7Z624 323 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 TCTE3Q8IZS6 198 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 SLC7A13Q8TCU3 470 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 LMX1AQ8TE12 382 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 ZNF416Q9BWM5 594 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 TTTY10Q9BZA0 68 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 ARL6Q9H0F7 186 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 QRSL1Q9H0R6 528 aaKnown RBP8.53□□□□□ -1.04
TOP1-201ENST00000361337 REEP4Q9H6H4 257 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 RETREG1Q9H6L5 497 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 GTF2A1LQ9UNN4 478 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 IGLV3-16A0A075B6K0 115 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 SERTM1A2A2V5 107 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 H0YIV9 168 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 GREM1O60565 184 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 ATG12O94817 140 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 SPDEFO95238 335 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 OLFM2O95897 454 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 SYPP08247 313 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 FURINP09958 794 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 PSMB5P28074 263 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 IMPA1P29218 277 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 CTBP2P56545 445 aa8.53□□□□□ -1.04
TOP1-201ENST00000361337 MLLT11Q13015 90 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms