RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ZNF780BQ9Y6R6 833 aa14.13□□□□□ -0.15
DDX55-202ENST00000354291 LOC100289279A0A1B0GTE1 492 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 CCDC151A5D8V7 595 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 DPRXA6NFQ7 191 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 MANBAO00462 879 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 TO15178 435 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 SCO2O43819 266 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 KIAA0513O60268 411 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 CBX7O95931 251 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 GSTA1P08263 222 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 USF1P22415 310 aaPredicted RBP14.12□□□□□ -0.15
DDX55-202ENST00000354291 IL12BP29460 328 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 HMOX2P30519 316 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 PRKAA2P54646 552 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 GAS1P54826 345 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 C21orf58P58505 322 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 LSM11P83369 360 aaKnown RBP eCLIP14.12□□□□□ -0.15
DDX55-202ENST00000354291 EFR3AQ14156 821 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 SLC29A2Q14542 456 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 RAB35Q15286 201 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 TAB1Q15750 504 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 TRMT12Q53H54 448 aaKnown RBP14.12□□□□□ -0.15
DDX55-202ENST00000354291 FIGNL1Q6PIW4 674 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 GPRIN3Q6ZVF9 776 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 DTX2Q86UW9 622 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 METTL25Q8N6Q8 603 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 OR2M3Q8NG83 312 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 METTL6Q8TCB7 284 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 HSD17B8Q92506 261 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 FAM168AQ92567 244 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 SLC35A4Q96G79 324 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 HDHD5Q9BXW7 423 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 MAT2BQ9NZL9 334 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 PSMC3IPQ9P2W1 217 aaPredicted RBP14.12□□□□□ -0.15
DDX55-202ENST00000354291 DCDC2Q9UHG0 476 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 MCM8Q9UJA3 840 aa14.12□□□□□ -0.15
DDX55-202ENST00000354291 GPR55Q9Y2T6 319 aaPredicted RBP14.12□□□□□ -0.15
DDX55-202ENST00000354291 DYSFO75923 2080 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 LINC01387J3KSC0 135 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 EIF1AYO14602 144 aaKnown RBP14.11□□□□□ -0.15
DDX55-202ENST00000354291 TCF21O43680 179 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 SS18L1O75177 396 aaPredicted RBP14.11□□□□□ -0.15
DDX55-202ENST00000354291 NME6O75414 186 aaPredicted RBP14.11□□□□□ -0.15
DDX55-202ENST00000354291 NTN1O95631 604 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 EGR1P18146 543 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 IL32P24001 234 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 ADH6P28332 368 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 ALDH9A1P49189 494 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 GZMKP49863 264 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 EMDP50402 254 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 PKNOX1P55347 436 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 STX5Q13190 355 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.11□□□□□ -0.15
DDX55-202ENST00000354291 AGAP6Q5VW22 663 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 MEX3DQ86XN8 651 aaKnown RBP14.11□□□□□ -0.15
DDX55-202ENST00000354291 SAMD14Q8IZD0 417 aaPredicted RBP14.11□□□□□ -0.15
DDX55-202ENST00000354291 FADS6Q8N9I5 356 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 KLHL29Q96CT2 875 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 L3HYPDHQ96EM0 354 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 TMEM237Q96Q45 408 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 HBEGFQ99075 208 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 GRIP2Q9C0E4 1043 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 FBXO34Q9NWN3 711 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 ZNF639Q9UID6 485 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 AP4B1Q9Y6B7 739 aa14.11□□□□□ -0.15
DDX55-202ENST00000354291 PKD1L1Q8TDX9 2849 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 GOLGA8RI6L899 631 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 TSPAN2O60636 221 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 BCAS2O75934 225 aaPredicted RBP14.1□□□□□ -0.15
DDX55-202ENST00000354291 ESRRBO95718 433 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 ENO1P06733 434 aaKnown RBP14.1□□□□□ -0.15
DDX55-202ENST00000354291 FAM153BP0C7A2 387 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 PCSK2P16519 638 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 CORO7P57737 925 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 NAA20P61599 178 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 LCP2Q13094 533 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 LTB4RQ15722 352 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 FAM153CQ494X1 144 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 SPIN4Q56A73 249 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 MFSD12Q6NUT3 480 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.1□□□□□ -0.15
DDX55-202ENST00000354291 PIWIL2Q8TC59 973 aaKnown RBP14.1□□□□□ -0.15
DDX55-202ENST00000354291 EFHD2Q96C19 240 aaPredicted RBP14.1□□□□□ -0.15
DDX55-202ENST00000354291 CCDC126Q96EE4 140 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 ZNF681Q96N22 645 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 RHOXF2Q9BQY4 288 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 PTGES2Q9H7Z7 377 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 L2HGDHQ9H9P8 463 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 EML4Q9HC35 981 aaKnown RBP14.1□□□□□ -0.15
DDX55-202ENST00000354291 UTS2RQ9UKP6 389 aa14.1□□□□□ -0.15
DDX55-202ENST00000354291 MCTS1Q9ULC4 181 aaKnown RBP14.1□□□□□ -0.15
DDX55-202ENST00000354291 GNG14A0A1W2PPG7 69 aa14.09□□□□□ -0.15
DDX55-202ENST00000354291 SHISA8B8ZZ34 492 aa14.09□□□□□ -0.15
DDX55-202ENST00000354291 GMFGO60234 142 aa14.09□□□□□ -0.15
DDX55-202ENST00000354291 SYNGR4O95473 234 aa14.09□□□□□ -0.15
DDX55-202ENST00000354291 OPN1LWP04000 364 aa14.09□□□□□ -0.15
DDX55-202ENST00000354291 ITGA2P17301 1181 aa14.09□□□□□ -0.15
DDX55-202ENST00000354291 CDH11P55287 796 aa14.09□□□□□ -0.15
DDX55-202ENST00000354291 MRPS35P82673 323 aaKnown RBP14.09□□□□□ -0.15
DDX55-202ENST00000354291 ACSM2AQ08AH3 577 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms