RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 DCTN4Q9UJW0 460 aa17.45■□□□□ 0.38
SYNE4-202ENST00000340477 PHF3Q92576 2039 aaKnown RBP17.45■□□□□ 0.38
SYNE4-202ENST00000340477 ICE1Q9Y2F5 2266 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 A0A0G2JND7 137 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 A0A1W2PQD3 144 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 STX11O75558 287 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 BMP7P18075 431 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 MSX1P28360 303 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 ATP4BP51164 291 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 ADORA2A-AS1P86434 159 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 ZNF630Q2M218 657 aaPredicted RBP17.44■□□□□ 0.38
SYNE4-202ENST00000340477 EMC4Q5J8M3 183 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 RAET1LQ5VY80 246 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 VASNQ6EMK4 673 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 ZAR1Q86SH2 424 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 ZNF614Q8N883 585 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 CHDHQ8NE62 594 aaPredicted RBP17.44■□□□□ 0.38
SYNE4-202ENST00000340477 OR4C3Q8NH37 302 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 XAGE5Q8WWM1 108 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 ITLN2Q8WWU7 325 aaPredicted RBP17.44■□□□□ 0.38
SYNE4-202ENST00000340477 THOC1Q96FV9 657 aaKnown RBP17.44■□□□□ 0.38
SYNE4-202ENST00000340477 INPP5KQ9BT40 448 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 TMEM45AQ9NWC5 275 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 FBXO34Q9NWN3 711 aa17.44■□□□□ 0.38
SYNE4-202ENST00000340477 NCOA6Q14686 2063 aaPredicted RBP17.43■□□□□ 0.38
SYNE4-202ENST00000340477 IGLV3-32A0A0A0MS00 114 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 AHRRA9YTQ3 701 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 ADAM10O14672 748 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 GSNP06396 782 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 VIMP08670 466 aaKnown RBP17.43■□□□□ 0.38
SYNE4-202ENST00000340477 OR12D1P0DN82 309 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 NCF2P19878 526 aaPredicted RBP17.43■□□□□ 0.38
SYNE4-202ENST00000340477 TCEA1P23193 301 aaKnown RBP17.43■□□□□ 0.38
SYNE4-202ENST00000340477 MAGEA8P43361 318 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 ZNF41P51814 821 aaPredicted RBP17.43■□□□□ 0.38
SYNE4-202ENST00000340477 ATP12AP54707 1039 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 CASP9P55211 416 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 RCAN2Q14206 197 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 ARHGAP11BQ3KRB8 267 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 MTERF4Q7Z6M4 381 aaKnown RBP17.43■□□□□ 0.38
SYNE4-202ENST00000340477 RNF130Q86XS8 419 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 ULK2Q8IYT8 1036 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 GATSQ8NAP1 163 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 PHOSPHO1Q8TCT1 267 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 ASB5Q8WWX0 329 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 C1GALT1C1Q96EU7 318 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 TIMP4Q99727 224 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 PRDM14Q9GZV8 571 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 SERHL2Q9H4I8 314 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 POLE3Q9NRF9 147 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 RPH3AQ9Y2J0 694 aaPredicted RBP17.43■□□□□ 0.38
SYNE4-202ENST00000340477 HRH3Q9Y5N1 445 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 KCNE3Q9Y6H6 103 aa17.43■□□□□ 0.38
SYNE4-202ENST00000340477 A0A087WZY1 265 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 H0Y3Z8 333 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 LINC01387J3KSC0 135 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 GTPBP1O00178 669 aaKnown RBP17.42■□□□□ 0.38
SYNE4-202ENST00000340477 NR5A2O00482 541 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 GMFGO60234 142 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 CHMP24386 653 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 CDKN2CP42773 168 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 PMPCAQ10713 525 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 ART3Q13508 389 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 GPR68Q15743 365 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 GPAT3Q53EU6 434 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 OR10Q1Q8NGQ4 319 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 CA5BP1Q8WTZ4 195 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 VPS33AQ96AX1 596 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 SDCCAG3Q96C92 435 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 SDF2Q99470 211 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 PIGQQ9BRB3 760 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 NMUR2Q9GZQ4 415 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 CCDC167Q9P0B6 97 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 STOML1Q9UBI4 398 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 LIPT1Q9Y234 373 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 PCNX1Q96RV3 2341 aa17.42■□□□□ 0.38
SYNE4-202ENST00000340477 COL12A1Q99715 3063 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 ARHGAP21Q5T5U3 1957 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 NPIPA5A0A0B4J1W7 369 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 C17orf51A8MQB3 221 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 PRSS44E7EML9 344 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 NPIPA7E9PJI5 369 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 HCRTR2O43614 444 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 CLDN14O95500 239 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 ZCCHC18P0CG32 403 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 NPIPA8P0DM63 369 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 POU3F2P20265 443 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-202ENST00000340477 NUP107P57740 925 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 GLYR1Q49A26 553 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-202ENST00000340477 APOOLQ6UXV4 268 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 NCCRP1Q6ZVX7 275 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-202ENST00000340477 B4GALNT2Q8NHY0 566 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 RFWD2Q8NHY2 731 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 PNPT1Q8TCS8 783 aaKnown RBP17.41■□□□□ 0.38
SYNE4-202ENST00000340477 OIT3Q8WWZ8 545 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 RAB8BQ92930 207 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 SPDL1Q96EA4 605 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 SH3YL1Q96HL8 342 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-202ENST00000340477 TTYH2Q9BSA4 534 aa17.41■□□□□ 0.38
SYNE4-202ENST00000340477 RTN4RQ9BZR6 473 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms