RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SYNPOQ8N3V7 929 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF224Q9NZL3 707 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 USP36Q9P275 1121 aaKnown RBP15.7■□□□□ 0.1
PHRF1-201ENST00000264555 DISC1C4P0D8 188 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 WRBO00258 174 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 SRPX2O60687 465 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-201ENST00000264555 LEXMQ3ZCV2 418 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 ALG10Q5BKT4 473 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 FCRLBQ6BAA4 426 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 OR5W2Q8NH69 310 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 SETD6Q8TBK2 473 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 ZDHHC5Q9C0B5 715 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 UCHL1P09936 223 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 NR0B1P51843 470 aaKnown RBP15.69■□□□□ 0.1
PHRF1-201ENST00000264555 PDE7AQ13946 482 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 SPNS2Q8IVW8 549 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF283Q8N7M2 679 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 TRIM43Q96BQ3 446 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-201ENST00000264555 STRADBQ9C0K7 418 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 ACTR6Q9GZN1 396 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 GLIPR2Q9H4G4 154 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 ACP2P11117 423 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 FRKP42685 505 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF91Q05481 1191 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 OR1Q1Q15612 314 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 AKIRIN2Q53H80 203 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 SLC35F2Q8IXU6 374 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF683Q8IZ20 524 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 PSORS1C1Q9UIG5 152 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 IER3IP1Q9Y5U9 82 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 MYO9BQ13459 2157 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 HTR3EA5X5Y0 456 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 PRRT4C9JH25 899 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 SNAPC5O75971 98 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 PKLRP30613 574 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 MLLT11Q13015 90 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-201ENST00000264555 SLCO4A1Q96BD0 722 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 C16orf58Q96GQ5 468 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 NDUFAF4Q9P032 175 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 FUOMA2VDF0 154 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 A8MVJ9 347 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 RLN2P04090 185 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 JMJD7P0C870 316 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 ALDH3B2P48448 385 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 ARHGDIBP52566 201 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 SLC18B1Q6NT16 456 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 OR6Q1Q8NGQ2 317 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 SPRYD4Q8WW59 207 aaPredicted RBP15.69■□□□□ 0.1
PHRF1-201ENST00000264555 DDX31Q9H8H2 851 aaKnown RBP15.69■□□□□ 0.1
PHRF1-201ENST00000264555 TESQ9UGI8 421 aaKnown RBP15.69■□□□□ 0.1
PHRF1-201ENST00000264555 ARFGEF1Q9Y6D6 1849 aa15.69■□□□□ 0.1
PHRF1-201ENST00000264555 PLPP1O14494 284 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 UBL4AP11441 157 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 CD38P28907 300 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 MFSD13AQ14CX5 517 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 KDM4DQ6B0I6 523 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 ABHD17CQ6PCB6 329 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 LRFN4Q6PJG9 635 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 TBPL2Q6SJ96 375 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 ZER1Q7Z7L7 766 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 PLCZ1Q86YW0 608 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 OR5T3Q8NGG3 340 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 OR51L1Q8NGJ5 315 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 TMEM41AQ96HV5 264 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 RABL2AQ9UBK7 228 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-201ENST00000264555 RABL2BQ9UNT1 228 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 WDR37Q9Y2I8 494 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF878C9JN71 531 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 BOLA2-SMG1P6H3BVE0 249 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 CD97P48960 835 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 GNG2P59768 71 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 ILKQ13418 452 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 SNTB2Q13425 540 aaKnown RBP15.68■□□□□ 0.1
PHRF1-201ENST00000264555 HSF5Q4G112 596 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-201ENST00000264555 ABCA11PQ4W5N1 156 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 OR9A4Q8NGU2 314 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 HAVCR2Q8TDQ0 301 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 COQ10AQ96MF6 247 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 B3GNT3Q9Y2A9 372 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 HSPB11Q9Y547 144 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 A8MV72 311 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-201ENST00000264555 NPIPA2E9PIF3 369 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 NPIPA3F8WFD2 350 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 LAMTOR5O43504 91 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 KCNJ5P48544 419 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 KCNJ10P78508 379 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 C18orf63Q68DL7 685 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 TECPR1Q7Z6L1 1165 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 TMED4Q7Z7H5 227 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 ZMYND19Q96E35 227 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-201ENST00000264555 CBLCQ9ULV8 474 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 KDM4BO94953 1096 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 RAB38P57729 211 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 PSMA6P60900 246 aaKnown RBP15.68■□□□□ 0.1
PHRF1-201ENST00000264555 RNF113BQ8IZP6 322 aaKnown RBP15.68■□□□□ 0.1
PHRF1-201ENST00000264555 INO80EQ8NBZ0 244 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-201ENST00000264555 GAB3Q8WWW8 586 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 NXPE2Q96DL1 559 aa15.68■□□□□ 0.1
PHRF1-201ENST00000264555 CXXC1Q9P0U4 656 aaPredicted RBP15.68■□□□□ 0.1
PHRF1-201ENST00000264555 ADH7P40394 386 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms