RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SCRN3Q0VDG4 424 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 SPRYD7Q5W111 196 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 TAS1R1Q7RTX1 841 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 FCRL1Q96LA6 429 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ARHGAP9Q9BRR9 750 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 CHD5Q8TDI0 1954 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 IRGMA1A4Y4 181 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 SLC22A23A1A5C7 686 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 OR5K3A6NET4 321 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 TRIM77I1YAP6 450 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 CBSLP0DN79 551 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 IMPA1P29218 277 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 NTSP30990 170 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 CBSP35520 551 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 RPL3P39023 403 aaKnown RBP14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 EIF4EBP2Q13542 120 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF273Q14593 569 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ZDHHC20Q5W0Z9 365 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 HBMQ6B0K9 141 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 GRHL2Q6ISB3 625 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 FUT10Q6P4F1 479 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 NKAIN4Q8IVV8 208 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 FAM26EQ8N5C1 309 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 CYB5D2Q8WUJ1 264 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF480Q8WV37 535 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ADAMTS14Q8WXS8 1223 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF559Q9BR84 538 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 TMEM231Q9H6L2 316 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF304Q9HCX3 659 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 GPR160Q9UJ42 338 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 IRAK3Q9Y616 596 aa14.92□□□□□ -0.02
PRPF40B-201ENST00000261897 KCNE1BA0A087WTH5 132 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 H7C0S8 307 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ONECUT3O60422 494 aaPredicted RBP14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 CLUP10909 449 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ACHEP22303 614 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 EDNRAP25101 427 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 PTH2RP49190 550 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 BTG1P62324 171 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 RING1Q06587 406 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 YOD1Q5VVQ6 348 aaPredicted RBP14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 TMEM107Q6UX40 140 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ADGRG3Q86Y34 549 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 OR5M1Q8NGP8 315 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 OR56B4Q8NH76 319 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ZMYND19Q96E35 227 aaPredicted RBP14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 DERL3Q96Q80 235 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ADARB2Q9NS39 739 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ASF1BQ9NVP2 202 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 BABAM2Q9NXR7 383 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 PLEKHA6Q9Y2H5 1048 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 COL11A2P13942 1736 aaPredicted RBP14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 TMEM229AB2RXF0 380 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 RPL4P36578 427 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 HEPHL1Q6MZM0 1159 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 NANPQ8TBE9 248 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 NKD1Q969G9 470 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ZG16BQ96DA0 208 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 PDCD1LG2Q9BQ51 273 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 HINT3Q9NQE9 182 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF98A6NK75 572 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 AGPAT2O15120 278 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 LGI1O95970 557 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 PSMB5P28074 263 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 PITPNAQ00169 270 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ID2Q02363 134 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 TGM3Q08188 693 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 FGL1Q08830 312 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 MINDY4Q4G0A6 757 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 C17orf64Q86WR6 236 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ARL14Q8N4G2 192 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 SIRT6Q8N6T7 355 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 FBXO22Q8NEZ5 403 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 TTLQ8NG68 377 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 GHSRQ92847 366 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 SEC22AQ96IW7 307 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 CA10Q9NS85 328 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 TAAR2Q9P1P5 351 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 ERVK-19Q9WJR5 959 aa14.91□□□□□ -0.02
PRPF40B-201ENST00000261897 BRCA1P38398 1863 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 ABHD14A-ACY1A0A1B0GW23 586 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 ZNF840PA6NDX5 716 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 GLTPD2A6NH11 291 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 NEDD8-MDP1E9PL57 170 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 QSOX1O00391 747 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 GMFGO60234 142 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 RAD1O60671 282 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 SOX30O94993 753 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 MT-ND5P03915 603 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 GKN3PP0CG01 181 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 TFPIP10646 304 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 SCGB2B2Q4G0G5 96 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 TMEM69Q5SWH9 247 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 METAP1DQ6UB28 335 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 FCRLAQ7L513 359 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 OR52I2Q8NH67 350 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 WDR20Q8TBZ3 569 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 UBTD2Q8WUN7 234 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 OR1F2PQ96R84 312 aa14.9□□□□□ -0.02
PRPF40B-201ENST00000261897 C7orf50Q9BRJ6 194 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms