RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TJP1Q07157 1748 aa20.65■□□□□ 0.9
PHGDH-211ENST00000641213 KDM4FA0A1W2PPD8 638 aa20.65■□□□□ 0.9
PHGDH-211ENST00000641213 RABL6Q3YEC7 729 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-211ENST00000641213 MCTP1Q6DN14 999 aa20.65■□□□□ 0.9
PHGDH-211ENST00000641213 A0A087WZG4 1122 aa20.64■□□□□ 0.89
PHGDH-211ENST00000641213 RASEFQ8IZ41 740 aa20.64■□□□□ 0.89
PHGDH-211ENST00000641213 CASP7P55210 303 aa20.63■□□□□ 0.89
PHGDH-211ENST00000641213 STRN4Q9NRL3 753 aa20.63■□□□□ 0.89
PHGDH-211ENST00000641213 PTPN12Q05209 780 aaKnown RBP20.63■□□□□ 0.89
PHGDH-211ENST00000641213 DDX54Q8TDD1 881 aaKnown RBP20.63■□□□□ 0.89
PHGDH-211ENST00000641213 PTH1RQ03431 593 aa20.62■□□□□ 0.89
PHGDH-211ENST00000641213 KLHL40Q2TBA0 621 aa20.62■□□□□ 0.89
PHGDH-211ENST00000641213 TTC14Q96N46 770 aa20.62■□□□□ 0.89
PHGDH-211ENST00000641213 ISY1Q9ULR0 285 aaKnown RBP20.62■□□□□ 0.89
PHGDH-211ENST00000641213 EVA1CP58658 441 aa20.61■□□□□ 0.89
PHGDH-211ENST00000641213 LMBRD1Q9NUN5 540 aa20.61■□□□□ 0.89
PHGDH-211ENST00000641213 DDX49Q9Y6V7 483 aaKnown RBP20.61■□□□□ 0.89
PHGDH-211ENST00000641213 TNS2Q63HR2 1409 aa20.61■□□□□ 0.89
PHGDH-211ENST00000641213 HIP1O00291 1037 aa20.6■□□□□ 0.89
PHGDH-211ENST00000641213 MRE11P49959 708 aa20.6■□□□□ 0.89
PHGDH-211ENST00000641213 TTLL7Q6ZT98 887 aa20.6■□□□□ 0.89
PHGDH-211ENST00000641213 BOLA2Q9H3K6 86 aa20.6■□□□□ 0.89
PHGDH-211ENST00000641213 A1BGP04217 495 aa20.6■□□□□ 0.89
PHGDH-211ENST00000641213 H7C1W4 665 aa20.59■□□□□ 0.89
PHGDH-211ENST00000641213 ITGB4P16144 1822 aa20.59■□□□□ 0.89
PHGDH-211ENST00000641213 BRD1O95696 1058 aa20.58■□□□□ 0.89
PHGDH-211ENST00000641213 TFCP2Q12800 502 aa20.58■□□□□ 0.89
PHGDH-211ENST00000641213 NMIQ13287 307 aaPredicted RBP20.58■□□□□ 0.89
PHGDH-211ENST00000641213 KCNB2Q92953 911 aa20.58■□□□□ 0.89
PHGDH-211ENST00000641213 FAM227BQ96M60 508 aa20.58■□□□□ 0.89
PHGDH-211ENST00000641213 CCDC171Q6TFL3 1326 aa20.58■□□□□ 0.89
PHGDH-211ENST00000641213 TNNI3KQ59H18 835 aa20.58■□□□□ 0.88
PHGDH-211ENST00000641213 GRPEL1Q9HAV7 217 aa20.58■□□□□ 0.88
PHGDH-211ENST00000641213 RTN4Q9NQC3 1192 aaKnown RBP20.58■□□□□ 0.88
PHGDH-211ENST00000641213 FPGT-TNNI3KV9GXZ4 949 aa20.58■□□□□ 0.88
PHGDH-211ENST00000641213 AK2P54819 239 aa20.57■□□□□ 0.88
PHGDH-211ENST00000641213 FOXO4P98177 505 aa20.57■□□□□ 0.88
PHGDH-211ENST00000641213 PRPF40BQ6NWY9 871 aaKnown RBP20.57■□□□□ 0.88
PHGDH-211ENST00000641213 GAS2L3Q86XJ1 694 aa20.57■□□□□ 0.88
PHGDH-211ENST00000641213 PANK2Q9BZ23 570 aa20.57■□□□□ 0.88
PHGDH-211ENST00000641213 SNRKQ9NRH2 765 aa20.57■□□□□ 0.88
PHGDH-211ENST00000641213 TCHHQ07283 1943 aa20.57■□□□□ 0.88
PHGDH-211ENST00000641213 NECTIN1Q15223 517 aa20.57■□□□□ 0.88
PHGDH-211ENST00000641213 LMBR1LQ6UX01 489 aa20.57■□□□□ 0.88
PHGDH-211ENST00000641213 FSD1Q9BTV5 496 aa20.57■□□□□ 0.88
PHGDH-211ENST00000641213 DBNLQ9UJU6 430 aaKnown RBP20.57■□□□□ 0.88
PHGDH-211ENST00000641213 CASTP20810 708 aaKnown RBP20.56■□□□□ 0.88
PHGDH-211ENST00000641213 FOXD4L5Q5VV16 416 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-211ENST00000641213 FOXD4L4Q8WXT5 416 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-211ENST00000641213 CWC25Q9NXE8 425 aaPredicted RBP20.56■□□□□ 0.88
PHGDH-211ENST00000641213 ATP5JP18859 108 aa20.55■□□□□ 0.88
PHGDH-211ENST00000641213 RUFY3Q7L099 469 aa20.55■□□□□ 0.88
PHGDH-211ENST00000641213 A0A0D9SFI3 127 aa20.55■□□□□ 0.88
PHGDH-211ENST00000641213 PRPF40AO75400 957 aaKnown RBP20.55■□□□□ 0.88
PHGDH-211ENST00000641213 ADCK5Q3MIX3 580 aa20.55■□□□□ 0.88
PHGDH-211ENST00000641213 MAP4K1Q92918 833 aa20.55■□□□□ 0.88
PHGDH-211ENST00000641213 CHAMP1Q96JM3 812 aa20.55■□□□□ 0.88
PHGDH-211ENST00000641213 LIMCH1Q9UPQ0 1083 aa20.55■□□□□ 0.88
PHGDH-211ENST00000641213 CPA1P15085 419 aa20.54■□□□□ 0.88
PHGDH-211ENST00000641213 TM6SF1Q9BZW5 370 aa20.54■□□□□ 0.88
PHGDH-211ENST00000641213 ZBTB3Q9H5J0 574 aa20.54■□□□□ 0.88
PHGDH-211ENST00000641213 RBM8AQ9Y5S9 174 aaKnown RBP20.54■□□□□ 0.88
PHGDH-211ENST00000641213 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
PHGDH-211ENST00000641213 JAKMIP1Q96N16 626 aaKnown RBP20.53■□□□□ 0.88
PHGDH-211ENST00000641213 ZSWIM6Q9HCJ5 1215 aa20.53■□□□□ 0.88
PHGDH-211ENST00000641213 TMOD3Q9NYL9 352 aa20.53■□□□□ 0.88
PHGDH-211ENST00000641213 MED23Q9ULK4 1368 aa20.53■□□□□ 0.88
PHGDH-211ENST00000641213 CREB3L3Q68CJ9 461 aa20.52■□□□□ 0.88
PHGDH-211ENST00000641213 EDC3Q96F86 508 aaKnown RBP20.52■□□□□ 0.88
PHGDH-211ENST00000641213 CHMP3Q9Y3E7 222 aa20.52■□□□□ 0.88
PHGDH-211ENST00000641213 VPS53Q5VIR6 699 aa20.52■□□□□ 0.87
PHGDH-211ENST00000641213 DBNDD2Q9BQY9 259 aa20.52■□□□□ 0.87
PHGDH-211ENST00000641213 LARP6Q9BRS8 491 aaKnown RBP20.52■□□□□ 0.87
PHGDH-211ENST00000641213 ZKSCAN1P17029 563 aaPredicted RBP20.51■□□□□ 0.87
PHGDH-211ENST00000641213 NCLP19338 710 aaKnown RBP20.51■□□□□ 0.87
PHGDH-211ENST00000641213 PDRG1Q9NUG6 133 aa20.51■□□□□ 0.87
PHGDH-211ENST00000641213 CYP46A1Q9Y6A2 500 aa20.51■□□□□ 0.87
PHGDH-211ENST00000641213 COL14A1Q05707 1796 aaKnown RBP20.51■□□□□ 0.87
PHGDH-211ENST00000641213 KAT6BQ8WYB5 2073 aa20.51■□□□□ 0.87
PHGDH-211ENST00000641213 JCADQ9P266 1359 aa20.51■□□□□ 0.87
PHGDH-211ENST00000641213 KCNJ4P48050 445 aa20.5■□□□□ 0.87
PHGDH-211ENST00000641213 ATG9AQ7Z3C6 839 aa20.5■□□□□ 0.87
PHGDH-211ENST00000641213 GPT2Q8TD30 523 aa20.5■□□□□ 0.87
PHGDH-211ENST00000641213 BTG4Q9NY30 223 aa20.5■□□□□ 0.87
PHGDH-211ENST00000641213 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.5■□□□□ 0.87
PHGDH-211ENST00000641213 CAVIN1Q6NZI2 390 aaKnown RBP20.5■□□□□ 0.87
PHGDH-211ENST00000641213 RPAP1Q9BWH6 1393 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-211ENST00000641213 WDR33Q9C0J8 1336 aaKnown RBP20.49■□□□□ 0.87
PHGDH-211ENST00000641213 SLC27A2O14975 620 aa20.49■□□□□ 0.87
PHGDH-211ENST00000641213 ZNF589Q86UQ0 364 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-211ENST00000641213 PIGBQ92521 554 aa20.49■□□□□ 0.87
PHGDH-211ENST00000641213 ASAP1Q9ULH1 1129 aa20.49■□□□□ 0.87
PHGDH-211ENST00000641213 LARGE1O95461 756 aa20.48■□□□□ 0.87
PHGDH-211ENST00000641213 HAUS7Q99871 368 aa20.48■□□□□ 0.87
PHGDH-211ENST00000641213 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-211ENST00000641213 NDUFB9Q9Y6M9 179 aa20.48■□□□□ 0.87
PHGDH-211ENST00000641213 RFX7Q2KHR2 1363 aa20.48■□□□□ 0.87
PHGDH-211ENST00000641213 ZNF445P59923 1031 aa20.47■□□□□ 0.87
PHGDH-211ENST00000641213 ISCA1Q9BUE6 129 aa20.47■□□□□ 0.87
PHGDH-211ENST00000641213 PLCH1Q4KWH8 1693 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 964.9 ms