RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 FMNL2Q96PY5 1086 aa15.5■□□□□ 0.07
MECP2-226ENST00000640414 FAM177BA6PVY3 158 aa15.49■□□□□ 0.07
MECP2-226ENST00000640414 TEFQ10587 303 aa15.49■□□□□ 0.07
MECP2-226ENST00000640414 IL17REQ8NFR9 667 aa15.49■□□□□ 0.07
MECP2-226ENST00000640414 GLIS2Q9BZE0 524 aaPredicted RBP15.49■□□□□ 0.07
MECP2-226ENST00000640414 ZNF652Q9Y2D9 606 aa15.49■□□□□ 0.07
MECP2-226ENST00000640414 CC2D2BQ6DHV5 1058 aa15.48■□□□□ 0.07
MECP2-226ENST00000640414 LARGE2Q8N3Y3 721 aa15.48■□□□□ 0.07
MECP2-226ENST00000640414 ADARB2Q9NS39 739 aaKnown RBP15.48■□□□□ 0.07
MECP2-226ENST00000640414 GPRC5DQ9NZD1 345 aa15.48■□□□□ 0.07
MECP2-226ENST00000640414 NIP7Q9Y221 180 aaKnown RBP eCLIP15.48■□□□□ 0.07
MECP2-226ENST00000640414 KCNQ3O43525 872 aa15.47■□□□□ 0.07
MECP2-226ENST00000640414 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
MECP2-226ENST00000640414 NOGQ13253 232 aa15.47■□□□□ 0.07
MECP2-226ENST00000640414 SLC51AQ86UW1 340 aa15.47■□□□□ 0.07
MECP2-226ENST00000640414 ZNF408Q9H9D4 720 aa15.47■□□□□ 0.07
MECP2-226ENST00000640414 USP16Q9Y5T5 823 aa15.47■□□□□ 0.07
MECP2-226ENST00000640414 CRY2Q49AN0 593 aa15.46■□□□□ 0.07
MECP2-226ENST00000640414 PRAMEF22A3QJZ6 481 aa15.45■□□□□ 0.06
MECP2-226ENST00000640414 NIM1KQ8IY84 436 aa15.45■□□□□ 0.06
MECP2-226ENST00000640414 PGAP2Q9UHJ9 254 aa15.45■□□□□ 0.06
MECP2-226ENST00000640414 ABCC12Q96J65 1359 aa15.45■□□□□ 0.06
MECP2-226ENST00000640414 GNAT3A8MTJ3 354 aa15.44■□□□□ 0.06
MECP2-226ENST00000640414 GTF2E1P29083 439 aaPredicted RBP15.44■□□□□ 0.06
MECP2-226ENST00000640414 RGL2O15211 777 aa15.43■□□□□ 0.06
MECP2-226ENST00000640414 GRIPAP1Q4V328 841 aa15.43■□□□□ 0.06
MECP2-226ENST00000640414 NPC1L1Q9UHC9 1359 aa15.43■□□□□ 0.06
MECP2-226ENST00000640414 BTBD11A6QL63 1104 aa15.42■□□□□ 0.06
MECP2-226ENST00000640414 NBPF26B4DH59 902 aa15.42■□□□□ 0.06
MECP2-226ENST00000640414 PPIP5K2O43314 1243 aa15.42■□□□□ 0.06
MECP2-226ENST00000640414 DIAPH1O60610 1272 aaKnown RBP15.42■□□□□ 0.06
MECP2-226ENST00000640414 HOXA10P31260 410 aaPredicted RBP15.42■□□□□ 0.06
MECP2-226ENST00000640414 GMPSP49915 693 aaPredicted RBP15.42■□□□□ 0.06
MECP2-226ENST00000640414 HIRAP54198 1017 aaPredicted RBP15.42■□□□□ 0.06
MECP2-226ENST00000640414 HUNKP57058 714 aa15.42■□□□□ 0.06
MECP2-226ENST00000640414 CXCL9Q07325 125 aa15.42■□□□□ 0.06
MECP2-226ENST00000640414 HLFQ16534 295 aa15.42■□□□□ 0.06
MECP2-226ENST00000640414 NBPF10Q6P3W6 841 aaKnown RBP15.42■□□□□ 0.06
MECP2-226ENST00000640414 NUTM1Q86Y26 1132 aa15.42■□□□□ 0.06
MECP2-226ENST00000640414 NBPF15Q8N660 670 aa15.42■□□□□ 0.06
MECP2-226ENST00000640414 SAGE1Q9NXZ1 904 aa15.42■□□□□ 0.06
MECP2-226ENST00000640414 CEMIPQ8WUJ3 1361 aa15.41■□□□□ 0.06
MECP2-226ENST00000640414 FAM155AB1AL88 458 aaPredicted RBP15.41■□□□□ 0.06
MECP2-226ENST00000640414 TCERG1O14776 1098 aaKnown RBP15.41■□□□□ 0.06
MECP2-226ENST00000640414 AOC3Q16853 763 aa15.41■□□□□ 0.06
MECP2-226ENST00000640414 CDC37L1Q7L3B6 337 aa15.41■□□□□ 0.06
MECP2-226ENST00000640414 ZC3H15Q8WU90 426 aaKnown RBP15.41■□□□□ 0.06
MECP2-226ENST00000640414 RPGRQ92834 1020 aaKnown RBP15.41■□□□□ 0.06
MECP2-226ENST00000640414 RIC1Q4ADV7 1423 aa15.41■□□□□ 0.06
MECP2-226ENST00000640414 PPEF1O14829 653 aaPredicted RBP15.4■□□□□ 0.06
MECP2-226ENST00000640414 DLK2Q6UY11 383 aa15.4■□□□□ 0.06
MECP2-226ENST00000640414 GAS2L2Q8NHY3 880 aa15.4■□□□□ 0.06
MECP2-226ENST00000640414 RNF186Q9NXI6 227 aa15.4■□□□□ 0.06
MECP2-226ENST00000640414 KNSTRNQ9Y448 316 aa15.4■□□□□ 0.06
MECP2-226ENST00000640414 TRPA1O75762 1119 aa15.39■□□□□ 0.05
MECP2-226ENST00000640414 SNRPA1P09661 255 aaKnown RBP15.39■□□□□ 0.05
MECP2-226ENST00000640414 KIF23Q02241 960 aaPredicted RBP15.39■□□□□ 0.05
MECP2-226ENST00000640414 DIEXFQ68CQ4 756 aaKnown RBP15.39■□□□□ 0.05
MECP2-226ENST00000640414 RGMBQ6NW40 437 aa15.39■□□□□ 0.05
MECP2-226ENST00000640414 TRPM4Q8TD43 1214 aa15.39■□□□□ 0.05
MECP2-226ENST00000640414 ZNRF3Q9ULT6 936 aa15.39■□□□□ 0.05
MECP2-226ENST00000640414 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
MECP2-226ENST00000640414 CTU1Q7Z7A3 348 aaKnown RBP15.38■□□□□ 0.05
MECP2-226ENST00000640414 USP48Q86UV5 1035 aa15.38■□□□□ 0.05
MECP2-226ENST00000640414 CRAMP1Q96RY5 1269 aa15.38■□□□□ 0.05
MECP2-226ENST00000640414 NYXQ9GZU5 481 aa15.38■□□□□ 0.05
MECP2-226ENST00000640414 CDHR2Q9BYE9 1310 aa15.38■□□□□ 0.05
MECP2-226ENST00000640414 BCL2L13Q9BXK5 485 aa15.37■□□□□ 0.05
MECP2-226ENST00000640414 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
MECP2-226ENST00000640414 HPS5Q9UPZ3 1129 aa15.37■□□□□ 0.05
MECP2-226ENST00000640414 SHTN1A0MZ66 631 aa15.36■□□□□ 0.05
MECP2-226ENST00000640414 CCDC102AQ96A19 550 aa15.36■□□□□ 0.05
MECP2-226ENST00000640414 RBM17Q96I25 401 aaKnown RBP15.36■□□□□ 0.05
MECP2-226ENST00000640414 AKAP11Q9UKA4 1901 aa15.35■□□□□ 0.05
MECP2-226ENST00000640414 C3orf67Q6ZVT6 689 aa15.35■□□□□ 0.05
MECP2-226ENST00000640414 GCC1Q96CN9 775 aa15.35■□□□□ 0.05
MECP2-226ENST00000640414 GBA2Q9HCG7 927 aaPredicted RBP15.35■□□□□ 0.05
MECP2-226ENST00000640414 COL3A1P02461 1466 aaPredicted RBP15.34■□□□□ 0.05
MECP2-226ENST00000640414 NUP98P52948 1817 aa15.34■□□□□ 0.05
MECP2-226ENST00000640414 U2SURPO15042 1029 aaKnown RBP15.34■□□□□ 0.05
MECP2-226ENST00000640414 RAD17O75943 681 aa15.34■□□□□ 0.05
MECP2-226ENST00000640414 RTFDC1Q9BY42 306 aaPredicted RBP15.34■□□□□ 0.05
MECP2-226ENST00000640414 CNOT7Q9UIV1 285 aaKnown RBP15.34■□□□□ 0.05
MECP2-226ENST00000640414 ATP6V0A2Q9Y487 856 aa15.34■□□□□ 0.05
MECP2-226ENST00000640414 IBTKQ9P2D0 1353 aaPredicted RBP15.34■□□□□ 0.05
MECP2-226ENST00000640414 ZNF157P51786 506 aaPredicted RBP15.33■□□□□ 0.04
MECP2-226ENST00000640414 HABP4Q5JVS0 413 aaKnown RBP15.33■□□□□ 0.04
MECP2-226ENST00000640414 SUPT20HQ8NEM7 779 aa15.33■□□□□ 0.04
MECP2-226ENST00000640414 PHACTR3Q96KR7 559 aa15.33■□□□□ 0.04
MECP2-226ENST00000640414 CSRNP1Q96S65 589 aa15.33■□□□□ 0.04
MECP2-226ENST00000640414 UBN2Q6ZU65 1347 aa15.33■□□□□ 0.04
MECP2-226ENST00000640414 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
MECP2-226ENST00000640414 PER1O15534 1290 aaPredicted RBP15.32■□□□□ 0.04
MECP2-226ENST00000640414 GPTP24298 496 aa15.32■□□□□ 0.04
MECP2-226ENST00000640414 TNIP1Q15025 636 aa15.32■□□□□ 0.04
MECP2-226ENST00000640414 SUSD4Q5VX71 490 aa15.32■□□□□ 0.04
MECP2-226ENST00000640414 MICALL2Q8IY33 904 aa15.32■□□□□ 0.04
MECP2-226ENST00000640414 C2orf69Q8N8R5 385 aa15.32■□□□□ 0.04
MECP2-226ENST00000640414 TMX4Q9H1E5 349 aaPredicted RBP15.32■□□□□ 0.04
MECP2-226ENST00000640414 H7C1D1 291 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms