RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 DNAJC25Q9H1X3 360 aa19.38■□□□□ 0.69
SCARB2-210ENST00000638567 TTC41PQ6P2S7 1318 aa19.38■□□□□ 0.69
SCARB2-210ENST00000638567 STARD3NLO95772 234 aa19.38■□□□□ 0.69
SCARB2-210ENST00000638567 TMCO3Q6UWJ1 677 aa19.38■□□□□ 0.69
SCARB2-210ENST00000638567 LINS1Q8NG48 757 aa19.38■□□□□ 0.69
SCARB2-210ENST00000638567 ATP7AQ04656 1500 aa19.38■□□□□ 0.69
SCARB2-210ENST00000638567 PNMA6EA0A0J9YXQ4 647 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 SKIDA1Q1XH10 827 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 ARHGAP29Q52LW3 1261 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 ZMYND15Q9H091 742 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 LMBRD1Q9NUN5 540 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.37■□□□□ 0.69
SCARB2-210ENST00000638567 SBNO2Q9Y2G9 1366 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 EPS15P42566 896 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 DTNBO60941 627 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 ZNF445P59923 1031 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 LRRC59Q96AG4 307 aaKnown RBP19.37■□□□□ 0.69
SCARB2-210ENST00000638567 CDK5RAP3Q96JB5 506 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 MINDY4BA8MYZ0 360 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 CREB3L3Q68CJ9 461 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 IFNL2Q8IZJ0 200 aa19.37■□□□□ 0.69
SCARB2-210ENST00000638567 TYRO3Q06418 890 aa19.36■□□□□ 0.69
SCARB2-210ENST00000638567 STIM1Q13586 685 aa19.36■□□□□ 0.69
SCARB2-210ENST00000638567 CNNM3Q8NE01 707 aa19.36■□□□□ 0.69
SCARB2-210ENST00000638567 ARHGEF5Q12774 1597 aa19.36■□□□□ 0.69
SCARB2-210ENST00000638567 GSDMDP57764 484 aa19.36■□□□□ 0.69
SCARB2-210ENST00000638567 Q6ZUG5 572 aa19.36■□□□□ 0.69
SCARB2-210ENST00000638567 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
SCARB2-210ENST00000638567 EPB41L2O43491 1005 aaKnown RBP19.36■□□□□ 0.69
SCARB2-210ENST00000638567 SNRPA1P09661 255 aaKnown RBP19.36■□□□□ 0.69
SCARB2-210ENST00000638567 AXDND1Q5T1B0 1012 aaPredicted RBP19.36■□□□□ 0.69
SCARB2-210ENST00000638567 LEKR1Q6ZMV7 388 aa19.36■□□□□ 0.69
SCARB2-210ENST00000638567 ERVK-7P63135 1459 aa19.35■□□□□ 0.69
SCARB2-210ENST00000638567 ZSCAN12O43309 604 aa19.35■□□□□ 0.69
SCARB2-210ENST00000638567 ERLIN1O75477 346 aa19.35■□□□□ 0.69
SCARB2-210ENST00000638567 NOM1Q5C9Z4 860 aaKnown RBP19.35■□□□□ 0.69
SCARB2-210ENST00000638567 SAMD1Q6SPF0 538 aaPredicted RBP19.35■□□□□ 0.69
SCARB2-210ENST00000638567 MICU3Q86XE3 530 aa19.35■□□□□ 0.69
SCARB2-210ENST00000638567 CCDC144CPQ8IYA2 1237 aa19.35■□□□□ 0.69
SCARB2-210ENST00000638567 ABCC4O15439 1325 aa19.35■□□□□ 0.69
SCARB2-210ENST00000638567 NPHP3Q7Z494 1330 aa19.35■□□□□ 0.69
SCARB2-210ENST00000638567 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
SCARB2-210ENST00000638567 ATP10AO60312 1499 aa19.35■□□□□ 0.69
SCARB2-210ENST00000638567 AKAP4Q5JQC9 854 aa19.35■□□□□ 0.69
SCARB2-210ENST00000638567 LMBR1LQ6UX01 489 aa19.35■□□□□ 0.69
SCARB2-210ENST00000638567 CWC25Q9NXE8 425 aaPredicted RBP19.35■□□□□ 0.69
SCARB2-210ENST00000638567 IFIT3O14879 490 aaKnown RBP19.34■□□□□ 0.69
SCARB2-210ENST00000638567 GPTP24298 496 aa19.34■□□□□ 0.69
SCARB2-210ENST00000638567 KRT28Q7Z3Y7 464 aa19.34■□□□□ 0.69
SCARB2-210ENST00000638567 CGNQ9P2M7 1197 aaKnown RBP19.34■□□□□ 0.69
SCARB2-210ENST00000638567 SLC12A7Q9Y666 1083 aa19.34■□□□□ 0.69
SCARB2-210ENST00000638567 GOLGA8AA7E2F4 631 aa19.34■□□□□ 0.69
SCARB2-210ENST00000638567 ZMYM3Q14202 1370 aa19.34■□□□□ 0.69
SCARB2-210ENST00000638567 MAP3K5Q99683 1374 aa19.34■□□□□ 0.69
SCARB2-210ENST00000638567 CEP135Q66GS9 1140 aa19.33■□□□□ 0.69
SCARB2-210ENST00000638567 PLEKHF1Q96S99 279 aa19.33■□□□□ 0.69
SCARB2-210ENST00000638567 TMOD3Q9NYL9 352 aa19.33■□□□□ 0.69
SCARB2-210ENST00000638567 CEP131Q9UPN4 1083 aa19.33■□□□□ 0.69
SCARB2-210ENST00000638567 MCMDC2Q4G0Z9 681 aa19.33■□□□□ 0.69
SCARB2-210ENST00000638567 LDHAL6AQ6ZMR3 332 aa19.33■□□□□ 0.69
SCARB2-210ENST00000638567 GAS2L3Q86XJ1 694 aa19.33■□□□□ 0.69
SCARB2-210ENST00000638567 KLF18A0A0U1RQI7 1052 aa19.33■□□□□ 0.68
SCARB2-210ENST00000638567 SKILP12757 684 aa19.33■□□□□ 0.68
SCARB2-210ENST00000638567 EDC4Q6P2E9 1401 aaKnown RBP19.33■□□□□ 0.68
SCARB2-210ENST00000638567 CFAP65Q6ZU64 1925 aaKnown RBP19.33■□□□□ 0.68
SCARB2-210ENST00000638567 IGHMBP2P38935 993 aaKnown RBP19.33■□□□□ 0.68
SCARB2-210ENST00000638567 PKP1Q13835 747 aa19.33■□□□□ 0.68
SCARB2-210ENST00000638567 ANTXR1Q9H6X2 564 aa19.33■□□□□ 0.68
SCARB2-210ENST00000638567 TMEM63CQ9P1W3 806 aa19.33■□□□□ 0.68
SCARB2-210ENST00000638567 PLA2R1Q13018 1463 aa19.33■□□□□ 0.68
SCARB2-210ENST00000638567 IARSP41252 1262 aaKnown RBP19.32■□□□□ 0.68
SCARB2-210ENST00000638567 SNW1Q13573 536 aaKnown RBP19.32■□□□□ 0.68
SCARB2-210ENST00000638567 CHRNA2Q15822 529 aa19.32■□□□□ 0.68
SCARB2-210ENST00000638567 ZHX1Q9UKY1 873 aaPredicted RBP19.32■□□□□ 0.68
SCARB2-210ENST00000638567 FAM173BQ6P4H8 233 aa19.32■□□□□ 0.68
SCARB2-210ENST00000638567 RUFY3Q7L099 469 aa19.32■□□□□ 0.68
SCARB2-210ENST00000638567 DEF6Q9H4E7 631 aa19.32■□□□□ 0.68
SCARB2-210ENST00000638567 CCDC171Q6TFL3 1326 aa19.32■□□□□ 0.68
SCARB2-210ENST00000638567 CCDC196A0A1B0GTZ2 297 aa19.32■□□□□ 0.68
SCARB2-210ENST00000638567 PTGS1P23219 599 aa19.32■□□□□ 0.68
SCARB2-210ENST00000638567 MAP3K12Q12852 859 aa19.32■□□□□ 0.68
SCARB2-210ENST00000638567 TRMT112Q9UI30 125 aaKnown RBP19.32■□□□□ 0.68
SCARB2-210ENST00000638567 CPLX3Q8WVH0 158 aa19.31■□□□□ 0.68
SCARB2-210ENST00000638567 SGSM2O43147 1006 aa19.31■□□□□ 0.68
SCARB2-210ENST00000638567 LUZP1Q86V48 1076 aa19.31■□□□□ 0.68
SCARB2-210ENST00000638567 EIF3JO75822 258 aaKnown RBP19.31■□□□□ 0.68
SCARB2-210ENST00000638567 NCOA7Q8NI08 942 aa19.31■□□□□ 0.68
SCARB2-210ENST00000638567 TMX1Q9H3N1 280 aa19.31■□□□□ 0.68
SCARB2-210ENST00000638567 SNX14Q9Y5W7 946 aa19.31■□□□□ 0.68
SCARB2-210ENST00000638567 GADD45BO75293 160 aaPredicted RBP19.3■□□□□ 0.68
SCARB2-210ENST00000638567 KDM5AP29375 1690 aaKnown RBP19.3■□□□□ 0.68
SCARB2-210ENST00000638567 HOXC9P31274 260 aa19.3■□□□□ 0.68
SCARB2-210ENST00000638567 TCEAL9Q9UHQ7 104 aa19.3■□□□□ 0.68
SCARB2-210ENST00000638567 PAXBP1Q9Y5B6 917 aa19.3■□□□□ 0.68
SCARB2-210ENST00000638567 MRPS27Q92552 414 aaKnown RBP19.3■□□□□ 0.68
SCARB2-210ENST00000638567 CHST3Q7LGC8 479 aa19.29■□□□□ 0.68
SCARB2-210ENST00000638567 CD2BP2O95400 341 aaKnown RBP19.29■□□□□ 0.68
SCARB2-210ENST00000638567 NBPF7P0C2Y1 421 aaPredicted RBP19.29■□□□□ 0.68
SCARB2-210ENST00000638567 METAP2P50579 478 aaKnown RBP eCLIP19.29■□□□□ 0.68
SCARB2-210ENST00000638567 EIF5P55010 431 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms