RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 SIRPGQ9P1W8 387 aa3.53□□□□□ -1.84
HMHB1-202ENST00000638299 PCDH10Q9P2E7 1040 aa3.53□□□□□ -1.84
HMHB1-202ENST00000638299 FOXD3Q9UJU5 478 aaPredicted RBP3.53□□□□□ -1.84
HMHB1-202ENST00000638299 TTF2Q9UNY4 1162 aaKnown RBP3.53□□□□□ -1.84
HMHB1-202ENST00000638299 EFR3BQ9Y2G0 817 aa3.53□□□□□ -1.84
HMHB1-202ENST00000638299 HCN4Q9Y3Q4 1203 aa3.53□□□□□ -1.84
HMHB1-202ENST00000638299 A6NJY4 79 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 MINDY4BA8MYZ0 360 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 PPP1R12AO14974 1030 aaPredicted RBP3.52□□□□□ -1.85
HMHB1-202ENST00000638299 CDC45O75419 566 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 BCAMP50895 628 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 TBX4P57082 545 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 RHBDL3P58872 404 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 PPP4CP60510 307 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 COPS2P61201 443 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 ERVK-9P63128 1117 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 SQSTM1Q13501 440 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 TKFCQ3LXA3 575 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 NXPE4Q6UWF7 544 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 SMC5Q8IY18 1101 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 SEPT12Q8IYM1 358 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 STAG2Q8N3U4 1231 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 CELF2-AS1Q8N7Q2 184 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 ZDHHC1Q8WTX9 485 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 TSR2Q969E8 191 aaKnown RBP3.52□□□□□ -1.85
HMHB1-202ENST00000638299 CCDC74AQ96AQ1 378 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 SEC16BQ96JE7 1060 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 DNAJC7Q99615 494 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 TRIM55Q9BYV6 548 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 SCHIP1Q9P0W5 487 aaPredicted RBP3.52□□□□□ -1.85
HMHB1-202ENST00000638299 HPS5Q9UPZ3 1129 aa3.52□□□□□ -1.85
HMHB1-202ENST00000638299 WASLO00401 505 aaPredicted RBP3.51□□□□□ -1.85
HMHB1-202ENST00000638299 CPNE3O75131 537 aaKnown RBP3.51□□□□□ -1.85
HMHB1-202ENST00000638299 POLR3DP05423 398 aaPredicted RBP3.51□□□□□ -1.85
HMHB1-202ENST00000638299 HCLS1P14317 486 aaPredicted RBP3.51□□□□□ -1.85
HMHB1-202ENST00000638299 MASP1P48740 699 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 CDKN1CP49918 316 aaPredicted RBP3.51□□□□□ -1.85
HMHB1-202ENST00000638299 SMTNP53814 917 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 C21orf62-AS1Q17RA5 79 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 C11orf91Q3C1V1 193 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 ODR4Q5SWX8 454 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 APBB1IPQ7Z5R6 666 aaPredicted RBP3.51□□□□□ -1.85
HMHB1-202ENST00000638299 JAMLQ86YT9 394 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 EMID1Q96A84 441 aaPredicted RBP3.51□□□□□ -1.85
HMHB1-202ENST00000638299 ANAPC16Q96DE5 110 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 IFT43Q96FT9 208 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 SGSM3Q96HU1 749 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 PRR14Q9BWN1 585 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 ST7Q9NRC1 585 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 CNTN3Q9P232 1028 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 MAGEC2Q9UBF1 373 aaPredicted RBP3.51□□□□□ -1.85
HMHB1-202ENST00000638299 LEMD3Q9Y2U8 911 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 PRKAB1Q9Y478 270 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 PARP3Q9Y6F1 533 aa3.51□□□□□ -1.85
HMHB1-202ENST00000638299 POTEB2H3BUK9 544 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 EML1O00423 815 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 ADD1P35611 737 aaKnown RBP3.5□□□□□ -1.85
HMHB1-202ENST00000638299 PDE6BP35913 854 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 USP5P45974 858 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 ST13P50502 369 aaKnown RBP3.5□□□□□ -1.85
HMHB1-202ENST00000638299 PSMA6P60900 246 aaKnown RBP3.5□□□□□ -1.85
HMHB1-202ENST00000638299 SH3BP2P78314 561 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 MAP3K10Q02779 954 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 MTFR1Q15390 333 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 MAP9Q49MG5 647 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 TAF7LQ5H9L4 462 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 KIAA0907Q7Z7F0 614 aaPredicted RBP3.5□□□□□ -1.85
HMHB1-202ENST00000638299 TREML1Q86YW5 311 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 KIAA0825Q8IV33 1275 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 TRMT44Q8IYL2 757 aaKnown RBP3.5□□□□□ -1.85
HMHB1-202ENST00000638299 ALDH16A1Q8IZ83 802 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 SP7Q8TDD2 431 aaPredicted RBP3.5□□□□□ -1.85
HMHB1-202ENST00000638299 APPBP2Q92624 585 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 KLRG1Q96E93 195 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 NBPF3Q9H094 633 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 DNAJC25Q9H1X3 360 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 SLKQ9H2G2 1235 aaPredicted RBP3.5□□□□□ -1.85
HMHB1-202ENST00000638299 BCS1LQ9Y276 419 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 USP20Q9Y2K6 914 aa3.5□□□□□ -1.85
HMHB1-202ENST00000638299 SMAD7O15105 426 aaKnown RBP3.49□□□□□ -1.85
HMHB1-202ENST00000638299 CREB3O43889 395 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 PPFIA4O75335 1185 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 IL2RAP01589 272 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 POU3F3P20264 500 aaPredicted RBP3.49□□□□□ -1.85
HMHB1-202ENST00000638299 FAM160A1Q05DH4 1040 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 MAP3K11Q16584 847 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 POTEAQ6S8J7 498 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 CCDC81Q6ZN84 652 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 FERMT3Q86UX7 667 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 WDR75Q8IWA0 830 aaKnown RBP3.49□□□□□ -1.85
HMHB1-202ENST00000638299 MRPL50Q8N5N7 158 aaKnown RBP3.49□□□□□ -1.85
HMHB1-202ENST00000638299 FAM169BQ8N8A8 192 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 PRPF38AQ8NAV1 312 aaKnown RBP3.49□□□□□ -1.85
HMHB1-202ENST00000638299 ZNF784Q8NCA9 323 aaPredicted RBP3.49□□□□□ -1.85
HMHB1-202ENST00000638299 ZNF296Q8WUU4 475 aaPredicted RBP3.49□□□□□ -1.85
HMHB1-202ENST00000638299 BCO2Q9BYV7 579 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 ESF1Q9H501 851 aaKnown RBP3.49□□□□□ -1.85
HMHB1-202ENST00000638299 NPHS2Q9NP85 383 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 FAM8A1Q9UBU6 413 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 MSRB2Q9Y3D2 182 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms