RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 EIF6P56537 245 aaKnown RBP24.04■■□□□ 1.44
CTSD-209ENST00000637158 TTLL7Q6ZT98 887 aa24.04■■□□□ 1.44
CTSD-209ENST00000637158 RBM17Q96I25 401 aaKnown RBP24.04■■□□□ 1.44
CTSD-209ENST00000637158 PPP1R42Q7Z4L9 355 aa24.03■■□□□ 1.44
CTSD-209ENST00000637158 TMX4Q9H1E5 349 aaPredicted RBP24.03■■□□□ 1.44
CTSD-209ENST00000637158 KDM3BQ7LBC6 1761 aa24.03■■□□□ 1.44
CTSD-209ENST00000637158 ABCC12Q96J65 1359 aa24.03■■□□□ 1.44
CTSD-209ENST00000637158 GPTP24298 496 aa24.02■■□□□ 1.44
CTSD-209ENST00000637158 GIGYF2Q6Y7W6 1299 aaKnown RBP24.02■■□□□ 1.44
CTSD-209ENST00000637158 ZNF34Q8IZ26 560 aa24.02■■□□□ 1.44
CTSD-209ENST00000637158 CRAMP1Q96RY5 1269 aa24.02■■□□□ 1.44
CTSD-209ENST00000637158 ZBTB3Q9H5J0 574 aa24.02■■□□□ 1.44
CTSD-209ENST00000637158 RNF123Q5XPI4 1314 aa24.02■■□□□ 1.44
CTSD-209ENST00000637158 PARP10Q53GL7 1025 aa24.01■■□□□ 1.43
CTSD-209ENST00000637158 SUSD4Q5VX71 490 aa24.01■■□□□ 1.43
CTSD-209ENST00000637158 CNTROBQ8N137 903 aa24.01■■□□□ 1.43
CTSD-209ENST00000637158 SNED1Q8TER0 1413 aa24.01■■□□□ 1.43
CTSD-209ENST00000637158 NUP98P52948 1817 aa24■■□□□ 1.43
CTSD-209ENST00000637158 LMOD1P29536 600 aaPredicted RBP24■■□□□ 1.43
CTSD-209ENST00000637158 AIDAQ96BJ3 306 aa24■■□□□ 1.43
CTSD-209ENST00000637158 NLRP3Q96P20 1036 aa24■■□□□ 1.43
CTSD-209ENST00000637158 THUMPD2Q9BTF0 503 aaKnown RBP24■■□□□ 1.43
CTSD-209ENST00000637158 BABAM1Q9NWV8 329 aa24■■□□□ 1.43
CTSD-209ENST00000637158 UBN2Q6ZU65 1347 aa24■■□□□ 1.43
CTSD-209ENST00000637158 DLG5Q8TDM6 1919 aa24■■□□□ 1.43
CTSD-209ENST00000637158 LARGE2Q8N3Y3 721 aa23.99■■□□□ 1.43
CTSD-209ENST00000637158 TSPYL4Q9UJ04 414 aa23.99■■□□□ 1.43
CTSD-209ENST00000637158 PPEF1O14829 653 aaPredicted RBP23.98■■□□□ 1.43
CTSD-209ENST00000637158 VPS33BQ9H267 617 aa23.98■■□□□ 1.43
CTSD-209ENST00000637158 PRDM10Q9NQV6 1147 aa23.98■■□□□ 1.43
CTSD-209ENST00000637158 GJA3Q9Y6H8 435 aa23.98■■□□□ 1.43
CTSD-209ENST00000637158 NTSR2O95665 410 aa23.97■■□□□ 1.43
CTSD-209ENST00000637158 VEGFBP49765 207 aa23.97■■□□□ 1.43
CTSD-209ENST00000637158 MAP1SQ66K74 1059 aaPredicted RBP23.97■■□□□ 1.43
CTSD-209ENST00000637158 DEFB115Q30KQ5 88 aa23.96■■□□□ 1.43
CTSD-209ENST00000637158 RASSF10A6NK89 507 aa23.95■■□□□ 1.42
CTSD-209ENST00000637158 FOXN1O15353 648 aa23.95■■□□□ 1.42
CTSD-209ENST00000637158 CTCFP49711 727 aaPredicted RBP23.95■■□□□ 1.42
CTSD-209ENST00000637158 RIPK4P57078 832 aa23.95■■□□□ 1.42
CTSD-209ENST00000637158 LMOD3Q0VAK6 560 aa23.95■■□□□ 1.42
CTSD-209ENST00000637158 SLC10A5Q5PT55 438 aa23.95■■□□□ 1.42
CTSD-209ENST00000637158 UTP14AQ9BVJ6 771 aaKnown RBP23.95■■□□□ 1.42
CTSD-209ENST00000637158 ADAMTSL1Q8N6G6 1762 aa23.95■■□□□ 1.42
CTSD-209ENST00000637158 EIF2S2P20042 333 aaKnown RBP23.94■■□□□ 1.42
CTSD-209ENST00000637158 HSP90AB3PQ58FF7 597 aa23.94■■□□□ 1.42
CTSD-209ENST00000637158 NIM1KQ8IY84 436 aa23.94■■□□□ 1.42
CTSD-209ENST00000637158 USP50Q70EL3 339 aaPredicted RBP23.93■■□□□ 1.42
CTSD-209ENST00000637158 SUPT20HQ8NEM7 779 aa23.93■■□□□ 1.42
CTSD-209ENST00000637158 ATP6V0A2Q9Y487 856 aa23.93■■□□□ 1.42
CTSD-209ENST00000637158 TCERG1O14776 1098 aaKnown RBP23.92■■□□□ 1.42
CTSD-209ENST00000637158 PDIA6Q15084 440 aa23.92■■□□□ 1.42
CTSD-209ENST00000637158 RALBP1Q15311 655 aa23.92■■□□□ 1.42
CTSD-209ENST00000637158 LRP10Q7Z4F1 713 aa23.92■■□□□ 1.42
CTSD-209ENST00000637158 DDX21Q9NR30 783 aaKnown RBP eCLIP23.92■■□□□ 1.42
CTSD-209ENST00000637158 WBP1LQ9NX94 342 aa23.92■■□□□ 1.42
CTSD-209ENST00000637158 PPIP5K2O43314 1243 aa23.91■■□□□ 1.42
CTSD-209ENST00000637158 BBOX1O75936 387 aa23.91■■□□□ 1.42
CTSD-209ENST00000637158 SCNN1DP51172 638 aa23.91■■□□□ 1.42
CTSD-209ENST00000637158 MAP2K1Q02750 393 aaPredicted RBP23.91■■□□□ 1.42
CTSD-209ENST00000637158 ABT1Q9ULW3 272 aaKnown RBP23.91■■□□□ 1.42
CTSD-209ENST00000637158 EPS15P42566 896 aa23.89■■□□□ 1.41
CTSD-209ENST00000637158 WDR33Q9C0J8 1336 aaKnown RBP23.88■■□□□ 1.41
CTSD-209ENST00000637158 C3orf67Q6ZVT6 689 aa23.88■■□□□ 1.41
CTSD-209ENST00000637158 RTFDC1Q9BY42 306 aaPredicted RBP23.88■■□□□ 1.41
CTSD-209ENST00000637158 ZNRF3Q9ULT6 936 aa23.88■■□□□ 1.41
CTSD-209ENST00000637158 ABCC4O15439 1325 aa23.87■■□□□ 1.41
CTSD-209ENST00000637158 COL4A5P29400 1685 aa23.87■■□□□ 1.41
CTSD-209ENST00000637158 TMPOP42166 694 aaKnown RBP23.87■■□□□ 1.41
CTSD-209ENST00000637158 COPS6Q7L5N1 327 aa23.87■■□□□ 1.41
CTSD-209ENST00000637158 SP8Q8IXZ3 490 aa23.87■■□□□ 1.41
CTSD-209ENST00000637158 ADARB2Q9NS39 739 aaKnown RBP23.87■■□□□ 1.41
CTSD-209ENST00000637158 ECE1P42892 770 aa23.86■■□□□ 1.41
CTSD-209ENST00000637158 AOC3Q16853 763 aa23.86■■□□□ 1.41
CTSD-209ENST00000637158 DPP8Q6V1X1 898 aaPredicted RBP23.86■■□□□ 1.41
CTSD-209ENST00000637158 TCIRG1Q13488 830 aa23.85■■□□□ 1.41
CTSD-209ENST00000637158 PROSER3Q2NL68 480 aa23.85■■□□□ 1.41
CTSD-209ENST00000637158 DDX46Q7L014 1031 aaKnown RBP23.85■■□□□ 1.41
CTSD-209ENST00000637158 NLRP10Q86W26 655 aa23.85■■□□□ 1.41
CTSD-209ENST00000637158 GPRC5DQ9NZD1 345 aa23.85■■□□□ 1.41
CTSD-209ENST00000637158 AIMP1Q12904 312 aaKnown RBP23.84■■□□□ 1.41
CTSD-209ENST00000637158 TMC4Q7Z404 712 aa23.84■■□□□ 1.41
CTSD-209ENST00000637158 MPNDQ8N594 471 aa23.84■■□□□ 1.41
CTSD-209ENST00000637158 XAGE3Q8WTP9 111 aa23.84■■□□□ 1.41
CTSD-209ENST00000637158 TRMT112Q9UI30 125 aaKnown RBP23.84■■□□□ 1.41
CTSD-209ENST00000637158 SH3TC1Q8TE82 1336 aa23.84■■□□□ 1.41
CTSD-209ENST00000637158 ANXA1P04083 346 aa23.83■■□□□ 1.41
CTSD-209ENST00000637158 LBX1P52954 281 aa23.83■■□□□ 1.41
CTSD-209ENST00000637158 CXCL9Q07325 125 aa23.83■■□□□ 1.41
CTSD-209ENST00000637158 CDHR2Q9BYE9 1310 aa23.83■■□□□ 1.4
CTSD-209ENST00000637158 TNIP1Q15025 636 aa23.82■■□□□ 1.4
CTSD-209ENST00000637158 BEGAINQ9BUH8 593 aa23.82■■□□□ 1.4
CTSD-209ENST00000637158 LTBP1Q14766 1721 aa23.81■■□□□ 1.4
CTSD-209ENST00000637158 HCLS1P14317 486 aaPredicted RBP23.81■■□□□ 1.4
CTSD-209ENST00000637158 KIAA2012Q0VF49 1180 aa23.81■■□□□ 1.4
CTSD-209ENST00000637158 GRAPQ13588 217 aa23.81■■□□□ 1.4
CTSD-209ENST00000637158 CIAPIN1Q6FI81 312 aa23.81■■□□□ 1.4
CTSD-209ENST00000637158 GRAPLQ8TC17 118 aaPredicted RBP23.81■■□□□ 1.4
CTSD-209ENST00000637158 NECTIN2Q92692 538 aa23.81■■□□□ 1.4
CTSD-209ENST00000637158 CHL1O00533 1208 aa23.8■■□□□ 1.4
CTSD-209ENST00000637158 PAXIP1Q6ZW49 1069 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms