RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 PRPF4BQ13523 1007 aaKnown RBP7.04□□□□□ -1.28
CHD2-221ENST00000635856 CCDC92Q53HC0 331 aaPredicted RBP7.04□□□□□ -1.28
CHD2-221ENST00000635856 GPR161Q8N6U8 529 aaKnown RBP7.04□□□□□ -1.28
CHD2-221ENST00000635856 ARL10Q8N8L6 244 aa7.04□□□□□ -1.28
CHD2-221ENST00000635856 B4GALNT2Q8NHY0 566 aa7.04□□□□□ -1.28
CHD2-221ENST00000635856 SCLT1Q96NL6 688 aa7.04□□□□□ -1.28
CHD2-221ENST00000635856 OSBPL9Q96SU4 736 aa7.04□□□□□ -1.28
CHD2-221ENST00000635856 UBA5Q9GZZ9 404 aa7.04□□□□□ -1.28
CHD2-221ENST00000635856 MCM8Q9UJA3 840 aa7.04□□□□□ -1.28
CHD2-221ENST00000635856 EXOC6BQ9Y2D4 811 aa7.04□□□□□ -1.28
CHD2-221ENST00000635856 RBM47A0AV96 593 aaKnown RBP7.03□□□□□ -1.28
CHD2-221ENST00000635856 CDC45O75419 566 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 RPS6KA5O75582 802 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 SEC31AO94979 1220 aaKnown RBP7.03□□□□□ -1.28
CHD2-221ENST00000635856 GPTP24298 496 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 BICD2Q8TD16 824 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 AFAP1L1Q8TED9 768 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 EFCAB8A8MWE9 144 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 ZRANB2O95218 330 aaKnown RBP eCLIP7.03□□□□□ -1.28
CHD2-221ENST00000635856 LRMPQ12912 555 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 SNCBQ16143 134 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 AMOTQ4VCS5 1084 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 RNF187Q5TA31 235 aaPredicted RBP7.03□□□□□ -1.28
CHD2-221ENST00000635856 CAPRIN2Q6IMN6 1127 aaKnown RBP7.03□□□□□ -1.28
CHD2-221ENST00000635856 SPDYE1Q8NFV5 336 aaPredicted RBP7.03□□□□□ -1.28
CHD2-221ENST00000635856 ORC3Q9UBD5 711 aaPredicted RBP7.03□□□□□ -1.28
CHD2-221ENST00000635856 DNAI1Q9UI46 699 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 ZNF608Q9ULD9 1512 aaPredicted RBP7.03□□□□□ -1.28
CHD2-221ENST00000635856 KIF21AQ7Z4S6 1674 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 KIF5CO60282 957 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 HMMRO75330 724 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 GSDMDP57764 484 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 GRIK3Q13003 919 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 TSGA10IPQ3SY00 556 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 SPATS2Q86XZ4 545 aaKnown RBP7.03□□□□□ -1.28
CHD2-221ENST00000635856 NFATC2IPQ8NCF5 419 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 CXorf38Q8TB03 319 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 LRRCC1Q9C099 1032 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 TBC1D2BQ9UPU7 963 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 ATP2B2Q01814 1243 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 SLFN5Q08AF3 891 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 ARMC3Q5W041 872 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 SPATA21Q7Z572 469 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 RBM12BQ8IXT5 1001 aaKnown RBP7.03□□□□□ -1.28
CHD2-221ENST00000635856 C3orf20Q8ND61 904 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 CNNM3Q8NE01 707 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 TDRD7Q8NHU6 1098 aaKnown RBP7.03□□□□□ -1.28
CHD2-221ENST00000635856 PARD3BQ8TEW8 1205 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 MKL1Q969V6 931 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 DTNBP1Q96EV8 351 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 RGL1Q9NZL6 768 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 STAG3Q9UJ98 1225 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 FAM169AQ9Y6X4 670 aa7.03□□□□□ -1.28
CHD2-221ENST00000635856 PREPLQ4J6C6 727 aaPredicted RBP7.02□□□□□ -1.29
CHD2-221ENST00000635856 MEX3CQ5U5Q3 659 aaKnown RBP7.02□□□□□ -1.29
CHD2-221ENST00000635856 FAM71BQ8TC56 605 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 LZTS2Q9BRK4 669 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 CARD11Q9BXL7 1154 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 UNC45AQ9H3U1 944 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 EFCAB5A4FU69 1503 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 SLC8A3P57103 927 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 UBE2HP62256 183 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 MAP3K11Q16584 847 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 WDR78Q5VTH9 848 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 LRRC31Q6UY01 552 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 WDR66Q8TBY9 1149 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 CREB3O43889 395 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 SASH1O94885 1247 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 MRPL12P52815 198 aaKnown RBP7.02□□□□□ -1.29
CHD2-221ENST00000635856 BRD3Q15059 726 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 CCDC38Q502W7 563 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 RCSD1Q6JBY9 416 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 NOL8Q76FK4 1167 aaKnown RBP7.02□□□□□ -1.29
CHD2-221ENST00000635856 CCDC80Q76M96 950 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 WHAMMQ8TF30 809 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 TCHPQ9BT92 498 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 HOOK1Q9UJC3 728 aaKnown RBP7.02□□□□□ -1.29
CHD2-221ENST00000635856 USP47Q96K76 1375 aa7.02□□□□□ -1.29
CHD2-221ENST00000635856 CAVIN2O95810 425 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 DESP17661 470 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 GJA8P48165 433 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 DDR1Q08345 913 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 GOLGA1Q92805 767 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 ZSCAN12O43309 604 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 PHACTR2O75167 634 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 RPSAP08865 295 aaKnown RBP7.01□□□□□ -1.29
CHD2-221ENST00000635856 LRRFIP1Q32MZ4 808 aaKnown RBP7.01□□□□□ -1.29
CHD2-221ENST00000635856 CCDC178Q5BJE1 867 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 CC2D1AQ6P1N0 951 aaPredicted RBP7.01□□□□□ -1.29
CHD2-221ENST00000635856 GIMAP6Q6P9H5 292 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 USP48Q86UV5 1035 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 KIAA0825Q8IV33 1275 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 NOC3LQ8WTT2 800 aaKnown RBP7.01□□□□□ -1.29
CHD2-221ENST00000635856 EZH1Q92800 747 aaPredicted RBP7.01□□□□□ -1.29
CHD2-221ENST00000635856 TSC22D3Q99576 134 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 RBM42Q9BTD8 480 aaKnown RBP7.01□□□□□ -1.29
CHD2-221ENST00000635856 TMEM165Q9HC07 324 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 UTP6Q9NYH9 597 aaKnown RBP7.01□□□□□ -1.29
CHD2-221ENST00000635856 CHIC2Q9UKJ5 165 aa7.01□□□□□ -1.29
CHD2-221ENST00000635856 SMAPO00193 183 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms