RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 SENP3-EIF4A1A0A087X0R7 540 aa23.64■■□□□ 1.37
CLN6-210ENST00000635747 WWC1Q8IX03 1113 aa23.64■■□□□ 1.37
CLN6-210ENST00000635747 NLRP3Q96P20 1036 aa23.64■■□□□ 1.37
CLN6-210ENST00000635747 HOXA10P31260 410 aaPredicted RBP23.63■■□□□ 1.37
CLN6-210ENST00000635747 PRELPP51888 382 aa23.63■■□□□ 1.37
CLN6-210ENST00000635747 SLC10A5Q5PT55 438 aa23.63■■□□□ 1.37
CLN6-210ENST00000635747 RTKN2Q8IZC4 609 aa23.63■■□□□ 1.37
CLN6-210ENST00000635747 NMRK2Q9NPI5 230 aa23.63■■□□□ 1.37
CLN6-210ENST00000635747 SLX4Q8IY92 1834 aa23.62■■□□□ 1.37
CLN6-210ENST00000635747 GLTPD2A6NH11 291 aa23.62■■□□□ 1.37
CLN6-210ENST00000635747 TOMM70O94826 608 aa23.62■■□□□ 1.37
CLN6-210ENST00000635747 DPY19L2Q6NUT2 758 aa23.62■■□□□ 1.37
CLN6-210ENST00000635747 NLRP10Q86W26 655 aa23.62■■□□□ 1.37
CLN6-210ENST00000635747 C16orf71Q8IYS4 520 aaPredicted RBP23.62■■□□□ 1.37
CLN6-210ENST00000635747 RBM17Q96I25 401 aaKnown RBP23.62■■□□□ 1.37
CLN6-210ENST00000635747 IL16Q14005 1332 aa23.61■■□□□ 1.37
CLN6-210ENST00000635747 ELL2O00472 640 aaPredicted RBP23.61■■□□□ 1.37
CLN6-210ENST00000635747 CC2D2BQ6DHV5 1058 aa23.61■■□□□ 1.37
CLN6-210ENST00000635747 ARFGEF2Q9Y6D5 1785 aa23.6■■□□□ 1.37
CLN6-210ENST00000635747 GRIPAP1Q4V328 841 aa23.6■■□□□ 1.37
CLN6-210ENST00000635747 CCDC30Q5VVM6 783 aa23.6■■□□□ 1.37
CLN6-210ENST00000635747 C8orf58Q8NAV2 365 aa23.6■■□□□ 1.37
CLN6-210ENST00000635747 CRAMP1Q96RY5 1269 aa23.6■■□□□ 1.37
CLN6-210ENST00000635747 TRMT112Q9UI30 125 aaKnown RBP23.6■■□□□ 1.37
CLN6-210ENST00000635747 FKBP4Q02790 459 aaKnown RBP eCLIP23.59■■□□□ 1.37
CLN6-210ENST00000635747 FER1L6Q2WGJ9 1857 aa23.59■■□□□ 1.37
CLN6-210ENST00000635747 GOLGA2Q08379 1002 aa23.58■■□□□ 1.37
CLN6-210ENST00000635747 RRAGCQ9HB90 399 aa23.58■■□□□ 1.37
CLN6-210ENST00000635747 SH3TC1Q8TE82 1336 aa23.58■■□□□ 1.36
CLN6-210ENST00000635747 RIC3Q7Z5B4 369 aa23.57■■□□□ 1.36
CLN6-210ENST00000635747 TMX4Q9H1E5 349 aaPredicted RBP23.57■■□□□ 1.36
CLN6-210ENST00000635747 CEP350Q5VT06 3117 aa23.57■■□□□ 1.36
CLN6-210ENST00000635747 VEGFAP15692 232 aaPredicted RBP23.56■■□□□ 1.36
CLN6-210ENST00000635747 TRIM28Q13263 835 aaKnown RBP23.56■■□□□ 1.36
CLN6-210ENST00000635747 WDR63Q8IWG1 891 aa23.56■■□□□ 1.36
CLN6-210ENST00000635747 RBM46Q8TBY0 533 aaKnown RBP23.56■■□□□ 1.36
CLN6-210ENST00000635747 ISCA1Q9BUE6 129 aa23.56■■□□□ 1.36
CLN6-210ENST00000635747 DDX58O95786 925 aaKnown RBP23.55■■□□□ 1.36
CLN6-210ENST00000635747 HSPA6P17066 643 aa23.55■■□□□ 1.36
CLN6-210ENST00000635747 TSR2Q969E8 191 aaKnown RBP23.55■■□□□ 1.36
CLN6-210ENST00000635747 TNRC6CQ9HCJ0 1690 aaKnown RBP23.54■■□□□ 1.36
CLN6-210ENST00000635747 PSMD1Q99460 953 aa23.54■■□□□ 1.36
CLN6-210ENST00000635747 CACNA1SQ13698 1873 aa23.53■■□□□ 1.36
CLN6-210ENST00000635747 PPEF1O14829 653 aaPredicted RBP23.53■■□□□ 1.36
CLN6-210ENST00000635747 C3orf67Q6ZVT6 689 aa23.53■■□□□ 1.36
CLN6-210ENST00000635747 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
CLN6-210ENST00000635747 TSPYL6Q8N831 410 aa23.53■■□□□ 1.36
CLN6-210ENST00000635747 STK31Q9BXU1 1019 aa23.53■■□□□ 1.36
CLN6-210ENST00000635747 PHAXQ9H814 394 aaKnown RBP23.53■■□□□ 1.36
CLN6-210ENST00000635747 ANKRD36CQ5JPF3 1778 aa23.52■■□□□ 1.36
CLN6-210ENST00000635747 CCDC88AQ3V6T2 1871 aa23.52■■□□□ 1.36
CLN6-210ENST00000635747 ATP5J2-PTCD1G3V325 749 aa23.52■■□□□ 1.36
CLN6-210ENST00000635747 HCLS1P14317 486 aaPredicted RBP23.52■■□□□ 1.36
CLN6-210ENST00000635747 FSTL1Q12841 308 aa23.52■■□□□ 1.36
CLN6-210ENST00000635747 TWISTNBQ3B726 338 aaPredicted RBP23.52■■□□□ 1.36
CLN6-210ENST00000635747 OLFM4Q6UX06 510 aa23.52■■□□□ 1.36
CLN6-210ENST00000635747 SYNE4Q8N205 404 aa23.52■■□□□ 1.36
CLN6-210ENST00000635747 BBOX1O75936 387 aa23.51■■□□□ 1.35
CLN6-210ENST00000635747 HSP90B1P14625 803 aaKnown RBP23.51■■□□□ 1.35
CLN6-210ENST00000635747 DDX46Q7L014 1031 aaKnown RBP23.51■■□□□ 1.35
CLN6-210ENST00000635747 ZNF277Q9NRM2 450 aaPredicted RBP23.51■■□□□ 1.35
CLN6-210ENST00000635747 IARSP41252 1262 aaKnown RBP23.5■■□□□ 1.35
CLN6-210ENST00000635747 SALL2Q9Y467 1007 aaPredicted RBP23.5■■□□□ 1.35
CLN6-210ENST00000635747 DICER1Q9UPY3 1922 aaKnown RBP23.5■■□□□ 1.35
CLN6-210ENST00000635747 ATP6V0A2Q9Y487 856 aa23.49■■□□□ 1.35
CLN6-210ENST00000635747 TIAM2Q8IVF5 1701 aa23.49■■□□□ 1.35
CLN6-210ENST00000635747 TMC4Q7Z404 712 aa23.48■■□□□ 1.35
CLN6-210ENST00000635747 CCDC191Q8NCU4 936 aa23.48■■□□□ 1.35
CLN6-210ENST00000635747 JDP2Q8WYK2 163 aa23.48■■□□□ 1.35
CLN6-210ENST00000635747 FAM89AQ96GI7 184 aa23.48■■□□□ 1.35
CLN6-210ENST00000635747 ABCC4O15439 1325 aa23.48■■□□□ 1.35
CLN6-210ENST00000635747 ZBTB38Q8NAP3 1195 aaPredicted RBP23.47■■□□□ 1.35
CLN6-210ENST00000635747 SMC1BQ8NDV3 1235 aa23.47■■□□□ 1.35
CLN6-210ENST00000635747 MYD88Q99836 296 aa23.47■■□□□ 1.35
CLN6-210ENST00000635747 VPS33BQ9H267 617 aa23.47■■□□□ 1.35
CLN6-210ENST00000635747 SNED1Q8TER0 1413 aa23.47■■□□□ 1.35
CLN6-210ENST00000635747 TCERG1O14776 1098 aaKnown RBP23.46■■□□□ 1.35
CLN6-210ENST00000635747 APLP1P51693 650 aa23.46■■□□□ 1.35
CLN6-210ENST00000635747 GRAPQ13588 217 aa23.46■■□□□ 1.35
CLN6-210ENST00000635747 SF3B3Q15393 1217 aaKnown RBP23.46■■□□□ 1.35
CLN6-210ENST00000635747 GRAPLQ8TC17 118 aaPredicted RBP23.46■■□□□ 1.35
CLN6-210ENST00000635747 METTL22Q9BUU2 404 aaPredicted RBP23.46■■□□□ 1.35
CLN6-210ENST00000635747 FANCIQ9NVI1 1328 aa23.46■■□□□ 1.35
CLN6-210ENST00000635747 IRS4O14654 1257 aaPredicted RBP23.45■■□□□ 1.34
CLN6-210ENST00000635747 DDNO94850 711 aaPredicted RBP23.45■■□□□ 1.34
CLN6-210ENST00000635747 KSR2Q6VAB6 950 aa23.45■■□□□ 1.34
CLN6-210ENST00000635747 SP8Q8IXZ3 490 aa23.45■■□□□ 1.34
CLN6-210ENST00000635747 SUPT20HQ8NEM7 779 aa23.45■■□□□ 1.34
CLN6-210ENST00000635747 IQCA1LA6NCM1 817 aa23.44■■□□□ 1.34
CLN6-210ENST00000635747 POTECB2RU33 542 aa23.44■■□□□ 1.34
CLN6-210ENST00000635747 FZD9O00144 591 aa23.44■■□□□ 1.34
CLN6-210ENST00000635747 SLC4A2P04920 1241 aa23.44■■□□□ 1.34
CLN6-210ENST00000635747 MYH16Q9H6N6 1097 aa23.44■■□□□ 1.34
CLN6-210ENST00000635747 CWC25Q9NXE8 425 aaPredicted RBP23.44■■□□□ 1.34
CLN6-210ENST00000635747 WDR90Q96KV7 1748 aa23.43■■□□□ 1.34
CLN6-210ENST00000635747 NEXNQ0ZGT2 675 aa23.43■■□□□ 1.34
CLN6-210ENST00000635747 ZNF428Q96B54 188 aa23.43■■□□□ 1.34
CLN6-210ENST00000635747 L3MBTL3Q96JM7 780 aaPredicted RBP23.43■■□□□ 1.34
CLN6-210ENST00000635747 MAP3K2Q9Y2U5 619 aa23.43■■□□□ 1.34
CLN6-210ENST00000635747 PI4KAP2A4QPH2 592 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms