RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 AFAP1Q8N556 730 aa6.75□□□□□ -1.33
CDRT1-208ENST00000630868 OTUD5Q96G74 571 aa6.75□□□□□ -1.33
CDRT1-208ENST00000630868 NIF3L1Q9GZT8 377 aa6.75□□□□□ -1.33
CDRT1-208ENST00000630868 TMPRSS4Q9NRS4 437 aa6.75□□□□□ -1.33
CDRT1-208ENST00000630868 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
CDRT1-208ENST00000630868 TROQ12816 1431 aaPredicted RBP6.75□□□□□ -1.33
CDRT1-208ENST00000630868 FMN1Q68DA7 1419 aa6.75□□□□□ -1.33
CDRT1-208ENST00000630868 S1PR4O95977 384 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 CTSHP09668 335 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 GTF2F1P35269 517 aaKnown RBP eCLIP6.74□□□□□ -1.33
CDRT1-208ENST00000630868 ZNF516Q92618 1163 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 SLC4A9Q96Q91 983 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 HS3ST6Q96QI5 342 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 HIRIP3Q9BW71 556 aaPredicted RBP6.74□□□□□ -1.33
CDRT1-208ENST00000630868 CHMP4AQ9BY43 222 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 CUEDC1Q9NWM3 386 aaPredicted RBP6.74□□□□□ -1.33
CDRT1-208ENST00000630868 POLIQ9UNA4 740 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 MAP4K5Q9Y4K4 846 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 USP3Q9Y6I4 520 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 KIF14Q15058 1648 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 ABCA6Q8N139 1617 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 NPATQ14207 1427 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 CNTLNQ9NXG0 1405 aa6.74□□□□□ -1.33
CDRT1-208ENST00000630868 GNA15P30679 374 aa6.73□□□□□ -1.33
CDRT1-208ENST00000630868 VASH1Q7L8A9 365 aaPredicted RBP6.73□□□□□ -1.33
CDRT1-208ENST00000630868 STAG2Q8N3U4 1231 aa6.73□□□□□ -1.33
CDRT1-208ENST00000630868 MYO19Q96H55 970 aa6.73□□□□□ -1.33
CDRT1-208ENST00000630868 CRELD1Q96HD1 420 aa6.73□□□□□ -1.33
CDRT1-208ENST00000630868 STAC3Q96MF2 364 aa6.73□□□□□ -1.33
CDRT1-208ENST00000630868 NLRP2Q9NX02 1062 aa6.73□□□□□ -1.33
CDRT1-208ENST00000630868 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.73□□□□□ -1.33
CDRT1-208ENST00000630868 PCDHGB7Q9Y5F8 929 aa6.73□□□□□ -1.33
CDRT1-208ENST00000630868 ABCC1P33527 1531 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 ARHGAP5Q13017 1502 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 NCLP19338 710 aaKnown RBP6.72□□□□□ -1.33
CDRT1-208ENST00000630868 ATP2B1P20020 1258 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 DNAJA1P31689 397 aaKnown RBP6.72□□□□□ -1.33
CDRT1-208ENST00000630868 ITGAEP38570 1179 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 CCDC144BQ3MJ40 725 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 ZNF394Q53GI3 561 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 THSD4Q6ZMP0 1018 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 NOP9Q86U38 636 aaKnown RBP6.72□□□□□ -1.33
CDRT1-208ENST00000630868 ABTB2Q8N961 1025 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 ZNF784Q8NCA9 323 aaPredicted RBP6.72□□□□□ -1.33
CDRT1-208ENST00000630868 GMLQ99445 158 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 PIF1Q9H611 641 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 ARHGAP35Q9NRY4 1499 aa6.72□□□□□ -1.33
CDRT1-208ENST00000630868 CDC42BPBQ9Y5S2 1711 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 A6NJY4 79 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 PSMA6P60900 246 aaKnown RBP6.71□□□□□ -1.34
CDRT1-208ENST00000630868 ORC1Q13415 861 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 MTFR1Q15390 333 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 SH3PXD2AQ5TCZ1 1133 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 ALG1LQ6GMV1 187 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 ETFBKMTQ8IXQ9 262 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 ARMC5Q96C12 935 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 ESF1Q9H501 851 aaKnown RBP6.71□□□□□ -1.34
CDRT1-208ENST00000630868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.71□□□□□ -1.34
CDRT1-208ENST00000630868 RAB6BQ9NRW1 208 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 KIDINS220Q9ULH0 1771 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 PLA2R1Q13018 1463 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 MROH2AA6NES4 1674 aa6.71□□□□□ -1.34
CDRT1-208ENST00000630868 CLIP1P30622 1438 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 CAMSAP1Q5T5Y3 1602 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 LILRA1O75019 489 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 PDGFAP04085 211 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 FSHRP23945 695 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 RACK1P63244 317 aaKnown RBP6.7□□□□□ -1.34
CDRT1-208ENST00000630868 SKOR1P84550 965 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 DNM1Q05193 864 aaKnown RBP6.7□□□□□ -1.34
CDRT1-208ENST00000630868 TJAP1Q5JTD0 557 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 POTEAQ6S8J7 498 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 ANKRD13DQ6ZTN6 518 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 ANKRD13AQ8IZ07 590 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 NKX2-3Q8TAU0 364 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 EDEM1Q92611 657 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 NGLY1Q96IV0 654 aa6.7□□□□□ -1.34
CDRT1-208ENST00000630868 DDX41Q9UJV9 622 aaKnown RBP6.7□□□□□ -1.34
CDRT1-208ENST00000630868 TMA7Q9Y2S6 64 aaKnown RBP6.7□□□□□ -1.34
CDRT1-208ENST00000630868 TCOF1Q13428 1488 aaKnown RBP6.7□□□□□ -1.34
CDRT1-208ENST00000630868 PREX2Q70Z35 1606 aa6.69□□□□□ -1.34
CDRT1-208ENST00000630868 ITSN2Q9NZM3 1697 aa6.69□□□□□ -1.34
CDRT1-208ENST00000630868 UBAP1LF5GYI3 381 aa6.69□□□□□ -1.34
CDRT1-208ENST00000630868 MZF1P28698 734 aaPredicted RBP6.69□□□□□ -1.34
CDRT1-208ENST00000630868 SMTNP53814 917 aa6.69□□□□□ -1.34
CDRT1-208ENST00000630868 GNL2Q13823 731 aaKnown RBP6.69□□□□□ -1.34
CDRT1-208ENST00000630868 PMFBP1Q8TBY8 1022 aa6.69□□□□□ -1.34
CDRT1-208ENST00000630868 FBF1Q8TES7 1133 aa6.69□□□□□ -1.34
CDRT1-208ENST00000630868 CSRNP1Q96S65 589 aa6.69□□□□□ -1.34
CDRT1-208ENST00000630868 ZNF335Q9H4Z2 1342 aaPredicted RBP6.69□□□□□ -1.34
CDRT1-208ENST00000630868 ZMYM3Q14202 1370 aa6.69□□□□□ -1.34
CDRT1-208ENST00000630868 ZNF142P52746 1687 aaPredicted RBP6.68□□□□□ -1.34
CDRT1-208ENST00000630868 EML1O00423 815 aa6.68□□□□□ -1.34
CDRT1-208ENST00000630868 OPLAHO14841 1288 aa6.68□□□□□ -1.34
CDRT1-208ENST00000630868 GNRH1P01148 92 aa6.68□□□□□ -1.34
CDRT1-208ENST00000630868 IL2RAP01589 272 aa6.68□□□□□ -1.34
CDRT1-208ENST00000630868 BRD2P25440 801 aaKnown RBP6.68□□□□□ -1.34
CDRT1-208ENST00000630868 VARSP26640 1264 aaKnown RBP6.68□□□□□ -1.34
CDRT1-208ENST00000630868 ZAP70P43403 619 aa6.68□□□□□ -1.34
CDRT1-208ENST00000630868 TRIM32Q13049 653 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms