RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 KCNA3P22001 575 aa17.9■□□□□ 0.46
SNRPA1-216ENST00000626000 CHRNA5P30532 468 aa17.9■□□□□ 0.46
SNRPA1-216ENST00000626000 SOGA3Q5TF21 947 aa17.9■□□□□ 0.46
SNRPA1-216ENST00000626000 SUSD4Q5VX71 490 aa17.9■□□□□ 0.46
SNRPA1-216ENST00000626000 ISCA1Q9BUE6 129 aa17.9■□□□□ 0.46
SNRPA1-216ENST00000626000 PHAXQ9H814 394 aaKnown RBP17.9■□□□□ 0.46
SNRPA1-216ENST00000626000 SH3TC1Q8TE82 1336 aa17.9■□□□□ 0.46
SNRPA1-216ENST00000626000 FAM177BA6PVY3 158 aa17.89■□□□□ 0.45
SNRPA1-216ENST00000626000 YY1P25490 414 aa17.89■□□□□ 0.45
SNRPA1-216ENST00000626000 HNRNPUQ00839 825 aaKnown RBP eCLIP17.89■□□□□ 0.45
SNRPA1-216ENST00000626000 FLIIQ13045 1269 aa17.89■□□□□ 0.45
SNRPA1-216ENST00000626000 CCDC191Q8NCU4 936 aa17.89■□□□□ 0.45
SNRPA1-216ENST00000626000 ALDH1B1P30837 517 aa17.88■□□□□ 0.45
SNRPA1-216ENST00000626000 SLC10A5Q5PT55 438 aa17.88■□□□□ 0.45
SNRPA1-216ENST00000626000 TRMT2AQ8IZ69 625 aaKnown RBP17.88■□□□□ 0.45
SNRPA1-216ENST00000626000 NLRP3Q96P20 1036 aa17.88■□□□□ 0.45
SNRPA1-216ENST00000626000 METTL22Q9BUU2 404 aaPredicted RBP17.88■□□□□ 0.45
SNRPA1-216ENST00000626000 TRMT112Q9UI30 125 aaKnown RBP17.88■□□□□ 0.45
SNRPA1-216ENST00000626000 COL11A2P13942 1736 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-216ENST00000626000 FKBP5Q13451 457 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-216ENST00000626000 CRY2Q49AN0 593 aa17.87■□□□□ 0.45
SNRPA1-216ENST00000626000 ZNF622Q969S3 477 aaKnown RBP eCLIP17.87■□□□□ 0.45
SNRPA1-216ENST00000626000 MAP3K2Q9Y2U5 619 aa17.87■□□□□ 0.45
SNRPA1-216ENST00000626000 PI4KAP2A4QPH2 592 aa17.86■□□□□ 0.45
SNRPA1-216ENST00000626000 ALDH1L2Q3SY69 923 aa17.86■□□□□ 0.45
SNRPA1-216ENST00000626000 ERFEQ4G0M1 354 aa17.86■□□□□ 0.45
SNRPA1-216ENST00000626000 NUTM1Q86Y26 1132 aa17.86■□□□□ 0.45
SNRPA1-216ENST00000626000 PI4KAP1Q8N8J0 262 aa17.86■□□□□ 0.45
SNRPA1-216ENST00000626000 RPGRQ92834 1020 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-216ENST00000626000 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
SNRPA1-216ENST00000626000 GRIPAP1Q4V328 841 aa17.85■□□□□ 0.45
SNRPA1-216ENST00000626000 ZBED9Q6R2W3 1325 aa17.85■□□□□ 0.45
SNRPA1-216ENST00000626000 ABCC12Q96J65 1359 aa17.85■□□□□ 0.45
SNRPA1-216ENST00000626000 PTPRCP08575 1304 aa17.84■□□□□ 0.45
SNRPA1-216ENST00000626000 CCDC24Q8N4L8 307 aa17.84■□□□□ 0.45
SNRPA1-216ENST00000626000 ZBTB38Q8NAP3 1195 aaPredicted RBP17.84■□□□□ 0.45
SNRPA1-216ENST00000626000 DNAAF4Q8WXU2 420 aa17.84■□□□□ 0.45
SNRPA1-216ENST00000626000 RBM17Q96I25 401 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-216ENST00000626000 MYD88Q99836 296 aa17.84■□□□□ 0.45
SNRPA1-216ENST00000626000 LAMB2P55268 1798 aa17.84■□□□□ 0.45
SNRPA1-216ENST00000626000 ADCY9O60503 1353 aa17.83■□□□□ 0.45
SNRPA1-216ENST00000626000 GOLGB1Q14789 3259 aaKnown RBP17.83■□□□□ 0.44
SNRPA1-216ENST00000626000 ATP5J2-PTCD1G3V325 749 aa17.83■□□□□ 0.44
SNRPA1-216ENST00000626000 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-216ENST00000626000 CC2D2BQ6DHV5 1058 aa17.83■□□□□ 0.44
SNRPA1-216ENST00000626000 ARHGAP27Q6ZUM4 889 aa17.83■□□□□ 0.44
SNRPA1-216ENST00000626000 CDCA7LQ96GN5 454 aa17.83■□□□□ 0.44
SNRPA1-216ENST00000626000 CRAMP1Q96RY5 1269 aa17.83■□□□□ 0.44
SNRPA1-216ENST00000626000 TMX4Q9H1E5 349 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-216ENST00000626000 TCERG1O14776 1098 aaKnown RBP17.82■□□□□ 0.44
SNRPA1-216ENST00000626000 PCCAP05165 728 aaPredicted RBP17.82■□□□□ 0.44
SNRPA1-216ENST00000626000 PRPF40BQ6NWY9 871 aaKnown RBP17.82■□□□□ 0.44
SNRPA1-216ENST00000626000 LINS1Q8NG48 757 aa17.82■□□□□ 0.44
SNRPA1-216ENST00000626000 TNRC6CQ9HCJ0 1690 aaKnown RBP17.82■□□□□ 0.44
SNRPA1-216ENST00000626000 TMC4Q7Z404 712 aa17.81■□□□□ 0.44
SNRPA1-216ENST00000626000 WWC3Q9ULE0 1092 aa17.81■□□□□ 0.44
SNRPA1-216ENST00000626000 CDHR2Q9BYE9 1310 aa17.8■□□□□ 0.44
SNRPA1-216ENST00000626000 G2E3Q7L622 706 aa17.8■□□□□ 0.44
SNRPA1-216ENST00000626000 LTBP3Q9NS15 1303 aa17.79■□□□□ 0.44
SNRPA1-216ENST00000626000 ZC3H4Q9UPT8 1303 aaKnown RBP17.79■□□□□ 0.44
SNRPA1-216ENST00000626000 IRS4O14654 1257 aaPredicted RBP17.79■□□□□ 0.44
SNRPA1-216ENST00000626000 BRPF1P55201 1214 aaPredicted RBP17.79■□□□□ 0.44
SNRPA1-216ENST00000626000 CCDC93Q567U6 631 aa17.79■□□□□ 0.44
SNRPA1-216ENST00000626000 DDX46Q7L014 1031 aaKnown RBP17.79■□□□□ 0.44
SNRPA1-216ENST00000626000 SMC4Q9NTJ3 1288 aa17.79■□□□□ 0.44
SNRPA1-216ENST00000626000 DDX60Q8IY21 1712 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-216ENST00000626000 KIF16BQ96L93 1317 aa17.78■□□□□ 0.44
SNRPA1-216ENST00000626000 CACNA1SQ13698 1873 aa17.78■□□□□ 0.44
SNRPA1-216ENST00000626000 NEURL1BA8MQ27 555 aa17.78■□□□□ 0.44
SNRPA1-216ENST00000626000 SF3B3Q15393 1217 aaKnown RBP17.78■□□□□ 0.44
SNRPA1-216ENST00000626000 RTKN2Q8IZC4 609 aa17.78■□□□□ 0.44
SNRPA1-216ENST00000626000 FAM89AQ96GI7 184 aa17.78■□□□□ 0.44
SNRPA1-216ENST00000626000 SLX4Q8IY92 1834 aa17.77■□□□□ 0.44
SNRPA1-216ENST00000626000 PDE8AO60658 829 aa17.77■□□□□ 0.44
SNRPA1-216ENST00000626000 ALDH1L1O75891 902 aa17.77■□□□□ 0.44
SNRPA1-216ENST00000626000 BBOX1O75936 387 aa17.77■□□□□ 0.44
SNRPA1-216ENST00000626000 IGKV5-2P06315 115 aa17.77■□□□□ 0.44
SNRPA1-216ENST00000626000 HCLS1P14317 486 aaPredicted RBP17.77■□□□□ 0.44
SNRPA1-216ENST00000626000 MRPL50Q8N5N7 158 aaKnown RBP17.77■□□□□ 0.44
SNRPA1-216ENST00000626000 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
SNRPA1-216ENST00000626000 UTRNP46939 3433 aa17.76■□□□□ 0.43
SNRPA1-216ENST00000626000 C21orf2O43822 256 aa17.76■□□□□ 0.43
SNRPA1-216ENST00000626000 GCKRQ14397 625 aa17.76■□□□□ 0.43
SNRPA1-216ENST00000626000 CCDC152Q4G0S7 254 aa17.76■□□□□ 0.43
SNRPA1-216ENST00000626000 TAOK3Q9H2K8 898 aa17.76■□□□□ 0.43
SNRPA1-216ENST00000626000 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
SNRPA1-216ENST00000626000 LMNB1P20700 586 aa17.75■□□□□ 0.43
SNRPA1-216ENST00000626000 PPEF1O14829 653 aaPredicted RBP17.74■□□□□ 0.43
SNRPA1-216ENST00000626000 GRAPQ13588 217 aa17.74■□□□□ 0.43
SNRPA1-216ENST00000626000 CWF19L2Q2TBE0 894 aaKnown RBP17.74■□□□□ 0.43
SNRPA1-216ENST00000626000 GRAPLQ8TC17 118 aaPredicted RBP17.74■□□□□ 0.43
SNRPA1-216ENST00000626000 C7orf43Q8WVR3 580 aa17.74■□□□□ 0.43
SNRPA1-216ENST00000626000 SRCIN1Q9C0H9 1055 aa17.74■□□□□ 0.43
SNRPA1-216ENST00000626000 MYH3P11055 1940 aa17.74■□□□□ 0.43
SNRPA1-216ENST00000626000 H7C1W4 665 aa17.73■□□□□ 0.43
SNRPA1-216ENST00000626000 IPO8O15397 1037 aaKnown RBP17.73■□□□□ 0.43
SNRPA1-216ENST00000626000 BEND3Q5T5X7 828 aa17.73■□□□□ 0.43
SNRPA1-216ENST00000626000 API5Q9BZZ5 524 aaKnown RBP17.73■□□□□ 0.43
SNRPA1-216ENST00000626000 ATP6V0A2Q9Y487 856 aa17.73■□□□□ 0.43
SNRPA1-216ENST00000626000 ABCC4O15439 1325 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms