RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 CBFA2T2O43439 604 aa12.86□□□□□ -0.35
VPS8-227ENST00000625842 MBD3O95983 291 aa12.86□□□□□ -0.35
VPS8-227ENST00000625842 MFSD6Q6ZSS7 791 aa12.86□□□□□ -0.35
VPS8-227ENST00000625842 LDHBP07195 334 aaKnown RBP12.86□□□□□ -0.35
VPS8-227ENST00000625842 GNAT2P19087 354 aa12.86□□□□□ -0.35
VPS8-227ENST00000625842 GBP2P32456 591 aaPredicted RBP12.85□□□□□ -0.35
VPS8-227ENST00000625842 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
VPS8-227ENST00000625842 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
VPS8-227ENST00000625842 CNNM2Q9H8M5 875 aa12.85□□□□□ -0.35
VPS8-227ENST00000625842 TBCAO75347 108 aaKnown RBP12.85□□□□□ -0.35
VPS8-227ENST00000625842 ME1P48163 572 aa12.85□□□□□ -0.35
VPS8-227ENST00000625842 MCM10Q7L590 875 aa12.85□□□□□ -0.35
VPS8-227ENST00000625842 MNS1Q8NEH6 495 aa12.85□□□□□ -0.35
VPS8-227ENST00000625842 DDX11Q96FC9 970 aa12.85□□□□□ -0.35
VPS8-227ENST00000625842 KRT23Q9C075 422 aa12.85□□□□□ -0.35
VPS8-227ENST00000625842 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
VPS8-227ENST00000625842 STX8Q9UNK0 236 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 KRT85P78386 507 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 ATP2B3Q16720 1220 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 SYCP3Q8IZU3 236 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 TBC1D22AQ8WUA7 517 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 NR1I2O75469 434 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 HSP90B2PQ58FF3 399 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 ESR2Q92731 530 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 CCDC172P0C7W6 258 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 LIG1P18858 919 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 DLGAP5Q15398 846 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 FKBP15Q5T1M5 1219 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 ATP10AO60312 1499 aa12.84□□□□□ -0.35
VPS8-227ENST00000625842 IL15P40933 162 aaPredicted RBP12.83□□□□□ -0.35
VPS8-227ENST00000625842 UBE3BQ7Z3V4 1068 aa12.83□□□□□ -0.35
VPS8-227ENST00000625842 UBA5Q9GZZ9 404 aa12.83□□□□□ -0.35
VPS8-227ENST00000625842 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 ALDH1L1O75891 902 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 CCNA1P78396 465 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
VPS8-227ENST00000625842 KRT27Q7Z3Y8 459 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 MSANTD4Q8NCY6 345 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 GLT8D2Q9H1C3 349 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 BMP15O95972 392 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 CYP7A1P22680 504 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
VPS8-227ENST00000625842 HMGN5P82970 282 aaKnown RBP12.83□□□□□ -0.36
VPS8-227ENST00000625842 RGS22Q8NE09 1264 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 TAF4BQ92750 862 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 TCHPQ9BT92 498 aa12.83□□□□□ -0.36
VPS8-227ENST00000625842 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 PDRG1Q9NUG6 133 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 IQCEQ6IPM2 695 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 DENND2AQ9ULE3 1009 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 NOS1P29475 1434 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 RIMBP2O15034 1052 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 PPIP5K2O43314 1243 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 ZBED4O75132 1171 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 PICALMQ13492 652 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 MAP3K2Q9Y2U5 619 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 UFL1O94874 794 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 ANKRD36BQ8N2N9 1353 aa12.82□□□□□ -0.36
VPS8-227ENST00000625842 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
VPS8-227ENST00000625842 GOLGA8AA7E2F4 631 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 GOLGA8BA8MQT2 603 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 EIF5P55010 431 aaKnown RBP12.81□□□□□ -0.36
VPS8-227ENST00000625842 SPOUT1Q5T280 376 aaKnown RBP12.81□□□□□ -0.36
VPS8-227ENST00000625842 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 PANK1Q8TE04 598 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 TSR2Q969E8 191 aaKnown RBP12.81□□□□□ -0.36
VPS8-227ENST00000625842 KCNG1Q9UIX4 513 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 ABT1Q9ULW3 272 aaKnown RBP12.81□□□□□ -0.36
VPS8-227ENST00000625842 WDR62O43379 1518 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 CALM1P0DP23 149 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 CALM2P0DP24 149 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 CALM3P0DP25 149 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 FLT4P35916 1363 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 SLC8A3P57103 927 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
VPS8-227ENST00000625842 LARP1BQ659C4 914 aaKnown RBP12.81□□□□□ -0.36
VPS8-227ENST00000625842 GIGYF2Q6Y7W6 1299 aaKnown RBP12.81□□□□□ -0.36
VPS8-227ENST00000625842 PRXQ9BXM0 1461 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 WDR33Q9C0J8 1336 aaKnown RBP12.81□□□□□ -0.36
VPS8-227ENST00000625842 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
VPS8-227ENST00000625842 SH3TC1Q8TE82 1336 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 ACTN2P35609 894 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 HOOK3Q86VS8 718 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 EMILIN1Q9Y6C2 1016 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 URB2Q14146 1524 aaKnown RBP12.8□□□□□ -0.36
VPS8-227ENST00000625842 MPNDQ8N594 471 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 GRIN3BO60391 1043 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 PHACTR2O75167 634 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 FLIIQ13045 1269 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 IRS4O14654 1257 aaPredicted RBP12.8□□□□□ -0.36
VPS8-227ENST00000625842 SERPINC1P01008 464 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 EP400NLQ6ZTU2 488 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 GTPBP4Q9BZE4 634 aaKnown RBP12.8□□□□□ -0.36
VPS8-227ENST00000625842 ZMYND15Q9H091 742 aa12.8□□□□□ -0.36
VPS8-227ENST00000625842 SUPT20HL1Q3ZLR7 823 aa12.79□□□□□ -0.36
VPS8-227ENST00000625842 HAUS2Q9NVX0 235 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms