RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
ATRX-216ENST00000624403 ALDH1L1O75891 902 aa12.91□□□□□ -0.34
ATRX-216ENST00000624403 UBTFL1P0CB47 393 aaPredicted RBP12.91□□□□□ -0.34
ATRX-216ENST00000624403 NBPF14Q5TI25 921 aa12.91□□□□□ -0.34
ATRX-216ENST00000624403 MEX3CQ5U5Q3 659 aaKnown RBP12.91□□□□□ -0.34
ATRX-216ENST00000624403 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
ATRX-216ENST00000624403 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
ATRX-216ENST00000624403 PPP1R37O75864 691 aa12.9□□□□□ -0.34
ATRX-216ENST00000624403 A1BGP04217 495 aa12.9□□□□□ -0.34
ATRX-216ENST00000624403 RIC3Q7Z5B4 369 aa12.9□□□□□ -0.34
ATRX-216ENST00000624403 CHD1LQ86WJ1 897 aa12.9□□□□□ -0.34
ATRX-216ENST00000624403 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
ATRX-216ENST00000624403 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
ATRX-216ENST00000624403 BACH2Q9BYV9 841 aa12.9□□□□□ -0.34
ATRX-216ENST00000624403 DCTPP1Q9H773 170 aa12.9□□□□□ -0.34
ATRX-216ENST00000624403 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
ATRX-216ENST00000624403 DOT1LQ8TEK3 1739 aa12.9□□□□□ -0.34
ATRX-216ENST00000624403 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
ATRX-216ENST00000624403 HMMRO75330 724 aa12.89□□□□□ -0.35
ATRX-216ENST00000624403 ATP8B2P98198 1209 aa12.89□□□□□ -0.35
ATRX-216ENST00000624403 ANKRD45Q5TZF3 282 aa12.89□□□□□ -0.35
ATRX-216ENST00000624403 DNAJC10Q8IXB1 793 aa12.89□□□□□ -0.35
ATRX-216ENST00000624403 LINS1Q8NG48 757 aa12.89□□□□□ -0.35
ATRX-216ENST00000624403 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
ATRX-216ENST00000624403 LNPKQ9C0E8 428 aa12.89□□□□□ -0.35
ATRX-216ENST00000624403 NBPF7P0C2Y1 421 aaPredicted RBP12.88□□□□□ -0.35
ATRX-216ENST00000624403 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
ATRX-216ENST00000624403 CWF19L2Q2TBE0 894 aaKnown RBP12.88□□□□□ -0.35
ATRX-216ENST00000624403 FAM161AQ3B820 660 aa12.88□□□□□ -0.35
ATRX-216ENST00000624403 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
ATRX-216ENST00000624403 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
ATRX-216ENST00000624403 METTL22Q9BUU2 404 aaPredicted RBP12.88□□□□□ -0.35
ATRX-216ENST00000624403 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
ATRX-216ENST00000624403 AFF2P51816 1311 aa12.88□□□□□ -0.35
ATRX-216ENST00000624403 IGKV5-2P06315 115 aa12.87□□□□□ -0.35
ATRX-216ENST00000624403 PLBD2Q8NHP8 589 aa12.87□□□□□ -0.35
ATRX-216ENST00000624403 SLC4A9Q96Q91 983 aa12.87□□□□□ -0.35
ATRX-216ENST00000624403 MYD88Q99836 296 aa12.87□□□□□ -0.35
ATRX-216ENST00000624403 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
ATRX-216ENST00000624403 A0A0G2JS52 829 aa12.86□□□□□ -0.35
ATRX-216ENST00000624403 PNMA6EA0A0J9YXQ4 647 aa12.86□□□□□ -0.35
ATRX-216ENST00000624403 NEXNQ0ZGT2 675 aa12.86□□□□□ -0.35
ATRX-216ENST00000624403 C8orf34Q49A92 452 aa12.86□□□□□ -0.35
ATRX-216ENST00000624403 TTLL7Q6ZT98 887 aa12.86□□□□□ -0.35
ATRX-216ENST00000624403 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
ATRX-216ENST00000624403 C9orf78Q9NZ63 289 aaPredicted RBP12.86□□□□□ -0.35
ATRX-216ENST00000624403 UTYO14607 1347 aa12.86□□□□□ -0.35
ATRX-216ENST00000624403 NEURL1BA8MQ27 555 aa12.85□□□□□ -0.35
ATRX-216ENST00000624403 GRM8O00222 908 aa12.85□□□□□ -0.35
ATRX-216ENST00000624403 STARD3NLO95772 234 aa12.85□□□□□ -0.35
ATRX-216ENST00000624403 MYT1Q01538 1121 aa12.85□□□□□ -0.35
ATRX-216ENST00000624403 THSD7AQ9UPZ6 1657 aa12.85□□□□□ -0.35
ATRX-216ENST00000624403 ATRNO75882 1429 aa12.85□□□□□ -0.35
ATRX-216ENST00000624403 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
ATRX-216ENST00000624403 GCKRQ14397 625 aa12.84□□□□□ -0.35
ATRX-216ENST00000624403 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
ATRX-216ENST00000624403 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
ATRX-216ENST00000624403 TJP1Q07157 1748 aa12.83□□□□□ -0.36
ATRX-216ENST00000624403 KCNQ2O43526 872 aa12.83□□□□□ -0.36
ATRX-216ENST00000624403 PPP1R42Q7Z4L9 355 aa12.83□□□□□ -0.36
ATRX-216ENST00000624403 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
ATRX-216ENST00000624403 TRPC5Q9UL62 973 aaPredicted RBP12.83□□□□□ -0.36
ATRX-216ENST00000624403 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
ATRX-216ENST00000624403 ARFGEF2Q9Y6D5 1785 aa12.83□□□□□ -0.36
ATRX-216ENST00000624403 ATP5J2-PTCD1G3V325 749 aa12.82□□□□□ -0.36
ATRX-216ENST00000624403 APBB1O00213 710 aa12.82□□□□□ -0.36
ATRX-216ENST00000624403 SMARCA5O60264 1052 aaPredicted RBP12.82□□□□□ -0.36
ATRX-216ENST00000624403 ZBTB3Q9H5J0 574 aa12.82□□□□□ -0.36
ATRX-216ENST00000624403 EXOC6BQ9Y2D4 811 aa12.82□□□□□ -0.36
ATRX-216ENST00000624403 SRGAP3O43295 1099 aa12.81□□□□□ -0.36
ATRX-216ENST00000624403 MTX1Q13505 466 aa12.81□□□□□ -0.36
ATRX-216ENST00000624403 C16orf71Q8IYS4 520 aaPredicted RBP12.81□□□□□ -0.36
ATRX-216ENST00000624403 SMARCC1Q92922 1105 aaPredicted RBP12.81□□□□□ -0.36
ATRX-216ENST00000624403 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
ATRX-216ENST00000624403 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
ATRX-216ENST00000624403 NUP188Q5SRE5 1749 aa12.81□□□□□ -0.36
ATRX-216ENST00000624403 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
ATRX-216ENST00000624403 LOC102724428A0A0B4J2F2 783 aa12.8□□□□□ -0.36
ATRX-216ENST00000624403 ONECUT3O60422 494 aaPredicted RBP12.8□□□□□ -0.36
ATRX-216ENST00000624403 SIK1P57059 783 aa12.8□□□□□ -0.36
ATRX-216ENST00000624403 KIF6Q6ZMV9 814 aa12.8□□□□□ -0.36
ATRX-216ENST00000624403 PLEKHM2Q8IWE5 1019 aa12.8□□□□□ -0.36
ATRX-216ENST00000624403 ZBTB1Q9Y2K1 713 aa12.8□□□□□ -0.36
ATRX-216ENST00000624403 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
ATRX-216ENST00000624403 ITPK1Q13572 414 aa12.79□□□□□ -0.36
ATRX-216ENST00000624403 DOK7Q18PE1 504 aa12.79□□□□□ -0.36
ATRX-216ENST00000624403 ZNF710Q8N1W2 664 aa12.79□□□□□ -0.36
ATRX-216ENST00000624403 OTUD7AQ8TE49 926 aaPredicted RBP12.79□□□□□ -0.36
ATRX-216ENST00000624403 JARID2Q92833 1246 aaPredicted RBP12.79□□□□□ -0.36
ATRX-216ENST00000624403 LRRCC1Q9C099 1032 aa12.79□□□□□ -0.36
ATRX-216ENST00000624403 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
ATRX-216ENST00000624403 BICC1Q9H694 974 aaKnown RBP12.79□□□□□ -0.36
ATRX-216ENST00000624403 A0A087WZG4 1122 aa12.78□□□□□ -0.36
ATRX-216ENST00000624403 RAB11FIP3O75154 756 aa12.78□□□□□ -0.36
ATRX-216ENST00000624403 SURF6O75683 361 aaKnown RBP12.78□□□□□ -0.36
ATRX-216ENST00000624403 CASP7P55210 303 aa12.78□□□□□ -0.36
ATRX-216ENST00000624403 EPHA10Q5JZY3 1008 aa12.78□□□□□ -0.36
ATRX-216ENST00000624403 INTS5Q6P9B9 1019 aaKnown RBP12.78□□□□□ -0.36
ATRX-216ENST00000624403 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
ATRX-216ENST00000624403 UBE3BQ7Z3V4 1068 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms