RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 PIP4K2AP48426 406 aaPredicted RBP19.92■□□□□ 0.78
LDB3-208ENST00000623007 GIGYF2Q6Y7W6 1299 aaKnown RBP19.92■□□□□ 0.78
LDB3-208ENST00000623007 ILDR2Q71H61 639 aa19.92■□□□□ 0.78
LDB3-208ENST00000623007 PRIM1P49642 420 aaKnown RBP19.91■□□□□ 0.78
LDB3-208ENST00000623007 SYTL4Q96C24 671 aaPredicted RBP19.91■□□□□ 0.78
LDB3-208ENST00000623007 PLA2G12BQ9BX93 195 aa19.91■□□□□ 0.78
LDB3-208ENST00000623007 TJP1Q07157 1748 aa19.91■□□□□ 0.78
LDB3-208ENST00000623007 AACSQ86V21 672 aa19.91■□□□□ 0.78
LDB3-208ENST00000623007 FNBP4Q8N3X1 1017 aaPredicted RBP19.91■□□□□ 0.78
LDB3-208ENST00000623007 EVI5LQ96CN4 794 aa19.91■□□□□ 0.78
LDB3-208ENST00000623007 ZBTB3Q9H5J0 574 aa19.91■□□□□ 0.78
LDB3-208ENST00000623007 GPR108Q9NPR9 543 aa19.91■□□□□ 0.78
LDB3-208ENST00000623007 ST18O60284 1047 aa19.9■□□□□ 0.78
LDB3-208ENST00000623007 PCCAP05165 728 aaPredicted RBP19.9■□□□□ 0.78
LDB3-208ENST00000623007 SLC4A3P48751 1232 aa19.9■□□□□ 0.78
LDB3-208ENST00000623007 CDHR2Q9BYE9 1310 aa19.89■□□□□ 0.78
LDB3-208ENST00000623007 CIAO1O76071 339 aa19.89■□□□□ 0.77
LDB3-208ENST00000623007 SASH1O94885 1247 aa19.89■□□□□ 0.77
LDB3-208ENST00000623007 HSP90B1P14625 803 aaKnown RBP19.89■□□□□ 0.77
LDB3-208ENST00000623007 RFX5P48382 616 aaPredicted RBP19.89■□□□□ 0.77
LDB3-208ENST00000623007 PTPN12Q05209 780 aaKnown RBP19.89■□□□□ 0.77
LDB3-208ENST00000623007 NGLY1Q96IV0 654 aa19.89■□□□□ 0.77
LDB3-208ENST00000623007 PA2G4Q9UQ80 394 aaKnown RBP19.89■□□□□ 0.77
LDB3-208ENST00000623007 IL15P40933 162 aaPredicted RBP19.88■□□□□ 0.77
LDB3-208ENST00000623007 ZBTB38Q8NAP3 1195 aaPredicted RBP19.88■□□□□ 0.77
LDB3-208ENST00000623007 IL17RAQ96F46 866 aa19.88■□□□□ 0.77
LDB3-208ENST00000623007 AK7Q96M32 723 aa19.88■□□□□ 0.77
LDB3-208ENST00000623007 KIF2CQ99661 725 aa19.88■□□□□ 0.77
LDB3-208ENST00000623007 ANKRD36CQ5JPF3 1778 aa19.88■□□□□ 0.77
LDB3-208ENST00000623007 RGL2O15211 777 aa19.87■□□□□ 0.77
LDB3-208ENST00000623007 MCM2P49736 904 aa19.87■□□□□ 0.77
LDB3-208ENST00000623007 FOXO4P98177 505 aa19.87■□□□□ 0.77
LDB3-208ENST00000623007 EPHA10Q5JZY3 1008 aa19.87■□□□□ 0.77
LDB3-208ENST00000623007 LMBR1LQ6UX01 489 aa19.87■□□□□ 0.77
LDB3-208ENST00000623007 CIZ1Q9ULV3 898 aaPredicted RBP19.87■□□□□ 0.77
LDB3-208ENST00000623007 K7ELQ4 463 aaPredicted RBP19.87■□□□□ 0.77
LDB3-208ENST00000623007 MARCH10Q8NA82 808 aaPredicted RBP19.87■□□□□ 0.77
LDB3-208ENST00000623007 BCL9LQ86UU0 1499 aa19.86■□□□□ 0.77
LDB3-208ENST00000623007 RREB1Q92766 1687 aa19.86■□□□□ 0.77
LDB3-208ENST00000623007 RFX7Q2KHR2 1363 aa19.86■□□□□ 0.77
LDB3-208ENST00000623007 KIAA1211Q6ZU35 1233 aa19.86■□□□□ 0.77
LDB3-208ENST00000623007 RAD50Q92878 1312 aa19.86■□□□□ 0.77
LDB3-208ENST00000623007 TSHZ3Q63HK5 1081 aa19.85■□□□□ 0.77
LDB3-208ENST00000623007 CCDC57Q2TAC2 916 aa19.84■□□□□ 0.77
LDB3-208ENST00000623007 EAF2Q96CJ1 260 aaPredicted RBP19.84■□□□□ 0.77
LDB3-208ENST00000623007 DIAPH3Q9NSV4 1193 aa19.84■□□□□ 0.77
LDB3-208ENST00000623007 CCDC87Q9NVE4 849 aa19.84■□□□□ 0.77
LDB3-208ENST00000623007 CHMP5Q9NZZ3 219 aa19.84■□□□□ 0.77
LDB3-208ENST00000623007 TNNI3KQ59H18 835 aa19.84■□□□□ 0.77
LDB3-208ENST00000623007 C8orf37Q96NL8 207 aa19.84■□□□□ 0.77
LDB3-208ENST00000623007 ANTXR1Q9H6X2 564 aa19.84■□□□□ 0.77
LDB3-208ENST00000623007 ANO2Q9NQ90 1003 aa19.84■□□□□ 0.77
LDB3-208ENST00000623007 ZNF330Q9Y3S2 320 aaPredicted RBP19.84■□□□□ 0.77
LDB3-208ENST00000623007 FPGT-TNNI3KV9GXZ4 949 aa19.84■□□□□ 0.77
LDB3-208ENST00000623007 LOC102724428A0A0B4J2F2 783 aa19.83■□□□□ 0.76
LDB3-208ENST00000623007 SGSM2O43147 1006 aa19.83■□□□□ 0.76
LDB3-208ENST00000623007 ATP5JP18859 108 aa19.83■□□□□ 0.76
LDB3-208ENST00000623007 SIK1P57059 783 aa19.83■□□□□ 0.76
LDB3-208ENST00000623007 SIL1Q9H173 461 aa19.83■□□□□ 0.76
LDB3-208ENST00000623007 HSP90AA1P07900 732 aaKnown RBP19.82■□□□□ 0.76
LDB3-208ENST00000623007 ATP6V1AP38606 617 aa19.82■□□□□ 0.76
LDB3-208ENST00000623007 DZIP3Q86Y13 1208 aaKnown RBP19.82■□□□□ 0.76
LDB3-208ENST00000623007 SLC4A9Q96Q91 983 aa19.82■□□□□ 0.76
LDB3-208ENST00000623007 AKAP2Q9Y2D5 859 aa19.82■□□□□ 0.76
LDB3-208ENST00000623007 ZBTB1Q9Y2K1 713 aa19.82■□□□□ 0.76
LDB3-208ENST00000623007 CHMP3Q9Y3E7 222 aa19.82■□□□□ 0.76
LDB3-208ENST00000623007 PALLDQ8WX93 1383 aa19.82■□□□□ 0.76
LDB3-208ENST00000623007 KAT6BQ8WYB5 2073 aa19.82■□□□□ 0.76
LDB3-208ENST00000623007 EYA2O00167 538 aa19.81■□□□□ 0.76
LDB3-208ENST00000623007 EIF5P55010 431 aaKnown RBP19.81■□□□□ 0.76
LDB3-208ENST00000623007 CSF1RP07333 972 aa19.81■□□□□ 0.76
LDB3-208ENST00000623007 HSPA1LP34931 641 aa19.81■□□□□ 0.76
LDB3-208ENST00000623007 PARP10Q53GL7 1025 aa19.81■□□□□ 0.76
LDB3-208ENST00000623007 USP21Q9UK80 565 aa19.81■□□□□ 0.76
LDB3-208ENST00000623007 NBR1Q14596 966 aa19.8■□□□□ 0.76
LDB3-208ENST00000623007 NLRP10Q86W26 655 aa19.8■□□□□ 0.76
LDB3-208ENST00000623007 ZNF652Q9Y2D9 606 aa19.8■□□□□ 0.76
LDB3-208ENST00000623007 NUP98P52948 1817 aa19.79■□□□□ 0.76
LDB3-208ENST00000623007 HMGB2P26583 209 aaKnown RBP19.79■□□□□ 0.76
LDB3-208ENST00000623007 TFCP2Q12800 502 aa19.79■□□□□ 0.76
LDB3-208ENST00000623007 IFIT5Q13325 482 aaKnown RBP19.79■□□□□ 0.76
LDB3-208ENST00000623007 HSPA4P34932 840 aa19.78■□□□□ 0.76
LDB3-208ENST00000623007 NFKBIBQ15653 356 aa19.78■□□□□ 0.76
LDB3-208ENST00000623007 FAM98CQ17RN3 349 aaKnown RBP19.78■□□□□ 0.76
LDB3-208ENST00000623007 LRRFIP1Q32MZ4 808 aaKnown RBP19.78■□□□□ 0.76
LDB3-208ENST00000623007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.78■□□□□ 0.76
LDB3-208ENST00000623007 ARXQ96QS3 562 aa19.78■□□□□ 0.76
LDB3-208ENST00000623007 CCDC8Q9H0W5 538 aaPredicted RBP19.78■□□□□ 0.76
LDB3-208ENST00000623007 SLKQ9H2G2 1235 aaPredicted RBP19.78■□□□□ 0.76
LDB3-208ENST00000623007 SNRKQ9NRH2 765 aa19.78■□□□□ 0.76
LDB3-208ENST00000623007 THSD7AQ9UPZ6 1657 aa19.78■□□□□ 0.76
LDB3-208ENST00000623007 TAF7LQ5H9L4 462 aa19.78■□□□□ 0.76
LDB3-208ENST00000623007 ZNF34Q8IZ26 560 aa19.78■□□□□ 0.76
LDB3-208ENST00000623007 SPEF2Q9C093 1822 aa19.77■□□□□ 0.76
LDB3-208ENST00000623007 MYH3P11055 1940 aa19.77■□□□□ 0.76
LDB3-208ENST00000623007 PDE8AO60658 829 aa19.77■□□□□ 0.76
LDB3-208ENST00000623007 CRKLP46109 303 aaKnown RBP19.77■□□□□ 0.76
LDB3-208ENST00000623007 CLEC4GQ6UXB4 293 aa19.77■□□□□ 0.76
LDB3-208ENST00000623007 KLHDC4Q8TBB5 520 aa19.77■□□□□ 0.76
LDB3-208ENST00000623007 CWC22Q9HCG8 908 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms