RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 RIC3Q7Z5B4 369 aa14.13□□□□□ -0.15
C11orf54-215ENST00000617482 HDAC5Q9UQL6 1122 aa14.13□□□□□ -0.15
C11orf54-215ENST00000617482 ATP6V1DQ9Y5K8 247 aa14.13□□□□□ -0.15
C11orf54-215ENST00000617482 CHD2O14647 1828 aaKnown RBP14.13□□□□□ -0.15
C11orf54-215ENST00000617482 USP54Q70EL1 1684 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 DDX58O95786 925 aaKnown RBP14.12□□□□□ -0.15
C11orf54-215ENST00000617482 HCLS1P14317 486 aaPredicted RBP14.12□□□□□ -0.15
C11orf54-215ENST00000617482 DDX21Q9NR30 783 aaKnown RBP eCLIP14.12□□□□□ -0.15
C11orf54-215ENST00000617482 USP25Q9UHP3 1055 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 MTMR6Q9Y217 621 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 TCHHQ07283 1943 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 KDM3BQ7LBC6 1761 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 MCM5P33992 734 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 ST3GAL1Q11201 340 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 PDIA6Q15084 440 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 ZSCAN31Q96LW9 406 aaPredicted RBP14.12□□□□□ -0.15
C11orf54-215ENST00000617482 TCEANC2Q96MN5 208 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 TM6SF1Q9BZW5 370 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 TPCN1Q9ULQ1 816 aa14.12□□□□□ -0.15
C11orf54-215ENST00000617482 HEG1Q9ULI3 1381 aa14.11□□□□□ -0.15
C11orf54-215ENST00000617482 IGKV5-2P06315 115 aa14.11□□□□□ -0.15
C11orf54-215ENST00000617482 GIMAP6Q6P9H5 292 aa14.11□□□□□ -0.15
C11orf54-215ENST00000617482 JARID2Q92833 1246 aaPredicted RBP14.11□□□□□ -0.15
C11orf54-215ENST00000617482 MAP4K1Q92918 833 aa14.11□□□□□ -0.15
C11orf54-215ENST00000617482 SH2B1Q9NRF2 756 aaPredicted RBP14.11□□□□□ -0.15
C11orf54-215ENST00000617482 A0A0D9SFI3 127 aa14.11□□□□□ -0.15
C11orf54-215ENST00000617482 KCNB2Q92953 911 aa14.11□□□□□ -0.15
C11orf54-215ENST00000617482 ZNF830Q96NB3 372 aaPredicted RBP14.11□□□□□ -0.15
C11orf54-215ENST00000617482 FSD1Q9BTV5 496 aa14.11□□□□□ -0.15
C11orf54-215ENST00000617482 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
C11orf54-215ENST00000617482 SLC27A2O14975 620 aa14.1□□□□□ -0.15
C11orf54-215ENST00000617482 ZC3H6P61129 1189 aaKnown RBP14.1□□□□□ -0.15
C11orf54-215ENST00000617482 FAM184AQ8NB25 1140 aa14.1□□□□□ -0.15
C11orf54-215ENST00000617482 TAF6LQ9Y6J9 622 aa14.1□□□□□ -0.15
C11orf54-215ENST00000617482 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.1□□□□□ -0.15
C11orf54-215ENST00000617482 RBM10P98175 930 aaKnown RBP14.1□□□□□ -0.15
C11orf54-215ENST00000617482 EDC3Q96F86 508 aaKnown RBP14.1□□□□□ -0.15
C11orf54-215ENST00000617482 ADGRL3Q9HAR2 1447 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 LETM1O95202 739 aaPredicted RBP14.09□□□□□ -0.15
C11orf54-215ENST00000617482 PIP4K2AP48426 406 aaPredicted RBP14.09□□□□□ -0.15
C11orf54-215ENST00000617482 PLCB2Q00722 1185 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 ZNF790Q6PG37 636 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 FERMT3Q86UX7 667 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 UTYO14607 1347 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 HIP1O00291 1037 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 ADCY5O95622 1261 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 CSPP1Q1MSJ5 1256 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 UVSSAQ2YD98 709 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 EPHA10Q5JZY3 1008 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 LARP1BQ659C4 914 aaKnown RBP14.09□□□□□ -0.15
C11orf54-215ENST00000617482 NFATC2IPQ8NCF5 419 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 XAGE3Q8WTP9 111 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 MYD88Q99836 296 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 CHMP3Q9Y3E7 222 aa14.09□□□□□ -0.15
C11orf54-215ENST00000617482 TAF7LQ5H9L4 462 aa14.08□□□□□ -0.16
C11orf54-215ENST00000617482 FAM173BQ6P4H8 233 aa14.08□□□□□ -0.16
C11orf54-215ENST00000617482 LARP1Q6PKG0 1096 aaKnown RBP14.08□□□□□ -0.16
C11orf54-215ENST00000617482 COPS6Q7L5N1 327 aa14.08□□□□□ -0.16
C11orf54-215ENST00000617482 NCAPD2Q15021 1401 aa14.08□□□□□ -0.16
C11orf54-215ENST00000617482 LMO7Q8WWI1 1683 aa14.08□□□□□ -0.16
C11orf54-215ENST00000617482 NEURL1BA8MQ27 555 aa14.07□□□□□ -0.16
C11orf54-215ENST00000617482 PSMA5P28066 241 aa14.07□□□□□ -0.16
C11orf54-215ENST00000617482 NEXNQ0ZGT2 675 aa14.07□□□□□ -0.16
C11orf54-215ENST00000617482 ZNF589Q86UQ0 364 aaPredicted RBP14.07□□□□□ -0.16
C11orf54-215ENST00000617482 STK3Q13188 491 aa14.07□□□□□ -0.16
C11orf54-215ENST00000617482 GCKRQ14397 625 aa14.07□□□□□ -0.16
C11orf54-215ENST00000617482 BLOC1S2Q6QNY1 142 aa14.07□□□□□ -0.16
C11orf54-215ENST00000617482 KRT28Q7Z3Y7 464 aa14.07□□□□□ -0.16
C11orf54-215ENST00000617482 NLRP2Q9NX02 1062 aa14.07□□□□□ -0.16
C11orf54-215ENST00000617482 NDUFB9Q9Y6M9 179 aa14.07□□□□□ -0.16
C11orf54-215ENST00000617482 CRYBG1Q9Y4K1 1723 aa14.07□□□□□ -0.16
C11orf54-215ENST00000617482 TERF1P54274 439 aa14.06□□□□□ -0.16
C11orf54-215ENST00000617482 KIAA2012Q0VF49 1180 aa14.06□□□□□ -0.16
C11orf54-215ENST00000617482 CDC37L1Q7L3B6 337 aa14.06□□□□□ -0.16
C11orf54-215ENST00000617482 UQCRHLA0A096LP55 91 aa14.06□□□□□ -0.16
C11orf54-215ENST00000617482 UQCRHP07919 91 aa14.06□□□□□ -0.16
C11orf54-215ENST00000617482 RNF20Q5VTR2 975 aa14.06□□□□□ -0.16
C11orf54-215ENST00000617482 RAPGEF4Q8WZA2 1011 aa14.06□□□□□ -0.16
C11orf54-215ENST00000617482 DDX17Q92841 729 aaKnown RBP14.06□□□□□ -0.16
C11orf54-215ENST00000617482 TTC12Q9H892 705 aaPredicted RBP14.06□□□□□ -0.16
C11orf54-215ENST00000617482 KDM4AO75164 1064 aa14.05□□□□□ -0.16
C11orf54-215ENST00000617482 BCL11BQ9C0K0 894 aaPredicted RBP14.05□□□□□ -0.16
C11orf54-215ENST00000617482 SLC52A2Q9HAB3 445 aa14.05□□□□□ -0.16
C11orf54-215ENST00000617482 FAM13BQ9NYF5 915 aa14.05□□□□□ -0.16
C11orf54-215ENST00000617482 CHGBP05060 677 aa14.05□□□□□ -0.16
C11orf54-215ENST00000617482 ZNF496Q96IT1 587 aaPredicted RBP14.05□□□□□ -0.16
C11orf54-215ENST00000617482 FUCA2Q9BTY2 467 aa14.05□□□□□ -0.16
C11orf54-215ENST00000617482 USP16Q9Y5T5 823 aa14.05□□□□□ -0.16
C11orf54-215ENST00000617482 ERBB3P21860 1342 aa14.04□□□□□ -0.16
C11orf54-215ENST00000617482 RPS6KB1P23443 525 aa14.04□□□□□ -0.16
C11orf54-215ENST00000617482 TOB2Q14106 344 aaPredicted RBP14.04□□□□□ -0.16
C11orf54-215ENST00000617482 ANKRD13DQ6ZTN6 518 aa14.04□□□□□ -0.16
C11orf54-215ENST00000617482 TTC6Q86TZ1 520 aa14.04□□□□□ -0.16
C11orf54-215ENST00000617482 METTL22Q9BUU2 404 aaPredicted RBP14.04□□□□□ -0.16
C11orf54-215ENST00000617482 TFCP2Q12800 502 aa14.04□□□□□ -0.16
C11orf54-215ENST00000617482 CAMK4Q16566 473 aa14.04□□□□□ -0.16
C11orf54-215ENST00000617482 DNTTIP2Q5QJE6 756 aaKnown RBP14.04□□□□□ -0.16
C11orf54-215ENST00000617482 C17orf53Q8N3J3 647 aaPredicted RBP14.04□□□□□ -0.16
C11orf54-215ENST00000617482 SNRKQ9NRH2 765 aa14.04□□□□□ -0.16
C11orf54-215ENST00000617482 TFIP11Q9UBB9 837 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms