RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 PABPN1LA6NDY0 278 aaKnown RBP21.54■■□□□ 1.04
GABPB1-212ENST00000615671 HMGB1P09429 215 aaKnown RBP21.54■■□□□ 1.04
GABPB1-212ENST00000615671 ARL1P40616 181 aaPredicted RBP21.54■■□□□ 1.04
GABPB1-212ENST00000615671 ZBTB21Q9ULJ3 1066 aa21.54■■□□□ 1.04
GABPB1-212ENST00000615671 PI4KAP2A4QPH2 592 aa21.54■■□□□ 1.04
GABPB1-212ENST00000615671 CYP7A1P22680 504 aa21.54■■□□□ 1.04
GABPB1-212ENST00000615671 CCDC152Q4G0S7 254 aa21.54■■□□□ 1.04
GABPB1-212ENST00000615671 PI4KAP1Q8N8J0 262 aa21.54■■□□□ 1.04
GABPB1-212ENST00000615671 HOMER2Q9NSB8 354 aa21.54■■□□□ 1.04
GABPB1-212ENST00000615671 TROQ12816 1431 aaPredicted RBP21.54■■□□□ 1.04
GABPB1-212ENST00000615671 HLTFQ14527 1009 aaKnown RBP eCLIP21.54■■□□□ 1.04
GABPB1-212ENST00000615671 CRNKL1Q9BZJ0 848 aaKnown RBP21.54■■□□□ 1.04
GABPB1-212ENST00000615671 LDHCP07864 332 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 GJC1P36383 396 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 MCM4P33991 863 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 PTPN14Q15678 1187 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 IFT140Q96RY7 1462 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 CABLES1Q8TDN4 633 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 NF2P35240 595 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 TMC6Q7Z403 805 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 INCENPQ9NQS7 918 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 LRPPRCP42704 1394 aaKnown RBP21.53■■□□□ 1.04
GABPB1-212ENST00000615671 YEATS4O95619 227 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 STAMBPO95630 424 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 CETN1Q12798 172 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 SLC4A4Q9Y6R1 1079 aa21.53■■□□□ 1.04
GABPB1-212ENST00000615671 CALM1P0DP23 149 aa21.52■■□□□ 1.04
GABPB1-212ENST00000615671 CALM2P0DP24 149 aa21.52■■□□□ 1.04
GABPB1-212ENST00000615671 CALM3P0DP25 149 aa21.52■■□□□ 1.04
GABPB1-212ENST00000615671 SSFA2P28290 1259 aa21.52■■□□□ 1.04
GABPB1-212ENST00000615671 SP4Q02446 784 aa21.52■■□□□ 1.04
GABPB1-212ENST00000615671 CCDC12Q8WUD4 166 aaPredicted RBP21.52■■□□□ 1.04
GABPB1-212ENST00000615671 MPHOSPH6Q99547 160 aaKnown RBP21.52■■□□□ 1.04
GABPB1-212ENST00000615671 SUPT6HQ7KZ85 1726 aaKnown RBP21.52■■□□□ 1.04
GABPB1-212ENST00000615671 EVI5LQ96CN4 794 aa21.52■■□□□ 1.04
GABPB1-212ENST00000615671 AFMP43652 599 aa21.52■■□□□ 1.04
GABPB1-212ENST00000615671 ADGRF5Q8IZF2 1346 aa21.52■■□□□ 1.04
GABPB1-212ENST00000615671 USO1O60763 962 aaKnown RBP21.52■■□□□ 1.03
GABPB1-212ENST00000615671 TBCAO75347 108 aaKnown RBP21.52■■□□□ 1.03
GABPB1-212ENST00000615671 RARSP54136 660 aaKnown RBP21.52■■□□□ 1.03
GABPB1-212ENST00000615671 CCDC183Q5T5S1 534 aa21.52■■□□□ 1.03
GABPB1-212ENST00000615671 HDAC9Q9UKV0 1011 aa21.52■■□□□ 1.03
GABPB1-212ENST00000615671 CCDC174Q6PII3 467 aa21.51■■□□□ 1.03
GABPB1-212ENST00000615671 GRIPAP1Q4V328 841 aa21.51■■□□□ 1.03
GABPB1-212ENST00000615671 PHACTR2O75167 634 aa21.5■■□□□ 1.03
GABPB1-212ENST00000615671 BIN2Q9UBW5 565 aaPredicted RBP21.5■■□□□ 1.03
GABPB1-212ENST00000615671 ZSCAN12O43309 604 aa21.5■■□□□ 1.03
GABPB1-212ENST00000615671 AMPD3Q01432 767 aa21.5■■□□□ 1.03
GABPB1-212ENST00000615671 SMC1AQ14683 1233 aaKnown RBP21.5■■□□□ 1.03
GABPB1-212ENST00000615671 SBNO2Q9Y2G9 1366 aa21.5■■□□□ 1.03
GABPB1-212ENST00000615671 OTUD6BQ8N6M0 293 aa21.5■■□□□ 1.03
GABPB1-212ENST00000615671 IFIT1BQ5T764 474 aaKnown RBP21.5■■□□□ 1.03
GABPB1-212ENST00000615671 TFCP2L1Q9NZI6 479 aa21.5■■□□□ 1.03
GABPB1-212ENST00000615671 CHPF2Q9P2E5 772 aa21.5■■□□□ 1.03
GABPB1-212ENST00000615671 ORC3Q9UBD5 711 aaPredicted RBP21.5■■□□□ 1.03
GABPB1-212ENST00000615671 NIP7Q9Y221 180 aaKnown RBP eCLIP21.5■■□□□ 1.03
GABPB1-212ENST00000615671 UBA7P41226 1012 aa21.49■■□□□ 1.03
GABPB1-212ENST00000615671 GSTO1P78417 241 aa21.49■■□□□ 1.03
GABPB1-212ENST00000615671 OGFOD1Q8N543 542 aa21.49■■□□□ 1.03
GABPB1-212ENST00000615671 LIMCH1Q9UPQ0 1083 aa21.49■■□□□ 1.03
GABPB1-212ENST00000615671 TMEM110-MUSTN1A8MSY1 372 aa21.49■■□□□ 1.03
GABPB1-212ENST00000615671 SPECC1Q5M775 1068 aa21.49■■□□□ 1.03
GABPB1-212ENST00000615671 EXOC1Q9NV70 894 aa21.49■■□□□ 1.03
GABPB1-212ENST00000615671 NCOA7Q8NI08 942 aa21.49■■□□□ 1.03
GABPB1-212ENST00000615671 ZBTB9Q96C00 473 aa21.49■■□□□ 1.03
GABPB1-212ENST00000615671 CEP63Q96MT8 703 aa21.49■■□□□ 1.03
GABPB1-212ENST00000615671 FAM135AQ9P2D6 1515 aa21.48■■□□□ 1.03
GABPB1-212ENST00000615671 POLR3GO15318 223 aaPredicted RBP21.48■■□□□ 1.03
GABPB1-212ENST00000615671 RNF187Q5TA31 235 aaPredicted RBP21.48■■□□□ 1.03
GABPB1-212ENST00000615671 SH2B1Q9NRF2 756 aaPredicted RBP21.48■■□□□ 1.03
GABPB1-212ENST00000615671 GCOM1H8Y6P7 765 aaPredicted RBP21.47■■□□□ 1.03
GABPB1-212ENST00000615671 MYZAPP0CAP1 466 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 NECAB1Q8N987 351 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 ZNF408Q9H9D4 720 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 GJA3Q9Y6H8 435 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 ACEP12821 1306 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 SNRPA1P09661 255 aaKnown RBP21.47■■□□□ 1.03
GABPB1-212ENST00000615671 PAFAH1B1P43034 410 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 NEK1Q96PY6 1258 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 SCAND2PQ9GZW5 306 aaPredicted RBP21.47■■□□□ 1.03
GABPB1-212ENST00000615671 ZSWIM4Q9H7M6 989 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 MRVI1Q9Y6F6 885 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 ZCRB1Q8TBF4 217 aaKnown RBP21.47■■□□□ 1.03
GABPB1-212ENST00000615671 TCEANC2Q96MN5 208 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 WTAPQ15007 396 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 UTP14AQ9BVJ6 771 aaKnown RBP21.47■■□□□ 1.03
GABPB1-212ENST00000615671 TEX13AQ9BXU3 409 aaPredicted RBP21.47■■□□□ 1.03
GABPB1-212ENST00000615671 SSX2IPQ9Y2D8 614 aa21.47■■□□□ 1.03
GABPB1-212ENST00000615671 ALDH1L2Q3SY69 923 aa21.46■■□□□ 1.03
GABPB1-212ENST00000615671 STXBP4Q6ZWJ1 553 aa21.46■■□□□ 1.03
GABPB1-212ENST00000615671 USP25Q9UHP3 1055 aa21.46■■□□□ 1.03
GABPB1-212ENST00000615671 TRIM47Q96LD4 638 aa21.46■■□□□ 1.03
GABPB1-212ENST00000615671 MBIPQ9NS73 344 aa21.46■■□□□ 1.03
GABPB1-212ENST00000615671 ECHDC1Q9NTX5 307 aa21.46■■□□□ 1.03
GABPB1-212ENST00000615671 RBM27Q9P2N5 1060 aaKnown RBP21.46■■□□□ 1.03
GABPB1-212ENST00000615671 ADGRL1O94910 1474 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 TICAM2Q86XR7 235 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 JADE2Q9NQC1 790 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 TTC21AQ8NDW8 1320 aa21.45■■□□□ 1.02
GABPB1-212ENST00000615671 SHTN1A0MZ66 631 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms