RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 RAD50Q92878 1312 aa16.99■□□□□ 0.31
VPS36-207ENST00000611132 CD109Q6YHK3 1445 aa16.99■□□□□ 0.31
VPS36-207ENST00000611132 HSPA4P34932 840 aa16.99■□□□□ 0.31
VPS36-207ENST00000611132 IL13P35225 146 aa16.99■□□□□ 0.31
VPS36-207ENST00000611132 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
VPS36-207ENST00000611132 CBX8Q9HC52 389 aa16.99■□□□□ 0.31
VPS36-207ENST00000611132 KIAA0754O94854 1291 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 USP8P40818 1118 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 TMX1Q9H3N1 280 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 MAP3K2Q9Y2U5 619 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 CHL1O00533 1208 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 POLR3DP05423 398 aaPredicted RBP16.98■□□□□ 0.31
VPS36-207ENST00000611132 TXLNAP40222 546 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 CRACR2AQ9BSW2 395 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 AOX1Q06278 1338 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 PPFIA3O75145 1194 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 ISM2Q6H9L7 571 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 CNNM3Q8NE01 707 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 PALD1Q9ULE6 856 aa16.98■□□□□ 0.31
VPS36-207ENST00000611132 POTEB2H3BUK9 544 aa16.97■□□□□ 0.31
VPS36-207ENST00000611132 UBASH3AP57075 661 aa16.97■□□□□ 0.31
VPS36-207ENST00000611132 FAM173BQ6P4H8 233 aa16.97■□□□□ 0.31
VPS36-207ENST00000611132 PLA2R1Q13018 1463 aa16.97■□□□□ 0.31
VPS36-207ENST00000611132 FAM193AP78312 1265 aa16.97■□□□□ 0.31
VPS36-207ENST00000611132 DMTNQ08495 405 aa16.97■□□□□ 0.31
VPS36-207ENST00000611132 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
VPS36-207ENST00000611132 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
VPS36-207ENST00000611132 ANXA1P04083 346 aa16.97■□□□□ 0.31
VPS36-207ENST00000611132 SYT10Q6XYQ8 523 aa16.97■□□□□ 0.31
VPS36-207ENST00000611132 LRRC2Q9BYS8 371 aa16.96■□□□□ 0.31
VPS36-207ENST00000611132 CLSTN2Q9H4D0 955 aa16.96■□□□□ 0.31
VPS36-207ENST00000611132 HYPKQ9NX55 129 aa16.96■□□□□ 0.31
VPS36-207ENST00000611132 ORC3Q9UBD5 711 aaPredicted RBP16.96■□□□□ 0.31
VPS36-207ENST00000611132 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.31
VPS36-207ENST00000611132 ZSCAN25Q6NSZ9 544 aa16.96■□□□□ 0.31
VPS36-207ENST00000611132 CCDC148Q8NFR7 591 aa16.96■□□□□ 0.31
VPS36-207ENST00000611132 WASF1Q92558 559 aa16.96■□□□□ 0.31
VPS36-207ENST00000611132 GOLGA8BA8MQT2 603 aa16.96■□□□□ 0.31
VPS36-207ENST00000611132 Q6ZUG5 572 aa16.96■□□□□ 0.31
VPS36-207ENST00000611132 UTP14CQ5TAP6 766 aaKnown RBP16.95■□□□□ 0.3
VPS36-207ENST00000611132 KCNG4Q8TDN1 519 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 CCDC12Q8WUD4 166 aaPredicted RBP16.95■□□□□ 0.3
VPS36-207ENST00000611132 RTL1A6NKG5 1358 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 MAP9Q49MG5 647 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 PDLIM2Q96JY6 352 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 ZSWIM4Q9H7M6 989 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 ACEP12821 1306 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 POLR1AO95602 1720 aaPredicted RBP16.95■□□□□ 0.3
VPS36-207ENST00000611132 IFIT1P09914 478 aaKnown RBP16.95■□□□□ 0.3
VPS36-207ENST00000611132 IQCEQ6IPM2 695 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 ABCC1P33527 1531 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 CCDC57Q2TAC2 916 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 KLHL10Q6JEL2 608 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 CLEC17AQ6ZS10 378 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 USP16Q9Y5T5 823 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 NPATQ14207 1427 aa16.95■□□□□ 0.3
VPS36-207ENST00000611132 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
VPS36-207ENST00000611132 MYD88Q99836 296 aa16.94■□□□□ 0.3
VPS36-207ENST00000611132 SSH2Q76I76 1423 aa16.94■□□□□ 0.3
VPS36-207ENST00000611132 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
VPS36-207ENST00000611132 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
VPS36-207ENST00000611132 CEP89Q96ST8 783 aa16.94■□□□□ 0.3
VPS36-207ENST00000611132 FOXO3O43524 673 aa16.94■□□□□ 0.3
VPS36-207ENST00000611132 GTF2E1P29083 439 aaPredicted RBP16.94■□□□□ 0.3
VPS36-207ENST00000611132 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
VPS36-207ENST00000611132 GTF3C6Q969F1 213 aa16.94■□□□□ 0.3
VPS36-207ENST00000611132 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
VPS36-207ENST00000611132 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
VPS36-207ENST00000611132 CUL4AQ13619 759 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 IFNKQ9P0W0 207 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 STIM1Q13586 685 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 CCDC181Q5TID7 509 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 CCDC102BQ68D86 513 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 SIRT2Q8IXJ6 389 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 CPLX3Q8WVH0 158 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
VPS36-207ENST00000611132 SYKP43405 635 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 ELF2Q15723 593 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 CEP131Q9UPN4 1083 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 CLASP1Q7Z460 1538 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 CLSTN1O94985 981 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 NUP133Q8WUM0 1156 aa16.93■□□□□ 0.3
VPS36-207ENST00000611132 NSFL1CQ9UNZ2 370 aaKnown RBP16.92■□□□□ 0.3
VPS36-207ENST00000611132 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
VPS36-207ENST00000611132 MCM3P25205 808 aa16.92■□□□□ 0.3
VPS36-207ENST00000611132 LEO1Q8WVC0 666 aaPredicted RBP16.92■□□□□ 0.3
VPS36-207ENST00000611132 PYCARDQ9ULZ3 195 aa16.92■□□□□ 0.3
VPS36-207ENST00000611132 PA2G4Q9UQ80 394 aaKnown RBP16.92■□□□□ 0.3
VPS36-207ENST00000611132 RGS12O14924 1447 aa16.92■□□□□ 0.3
VPS36-207ENST00000611132 ATP10AO60312 1499 aa16.92■□□□□ 0.3
VPS36-207ENST00000611132 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
VPS36-207ENST00000611132 GOLIM4O00461 696 aa16.92■□□□□ 0.3
VPS36-207ENST00000611132 KIAA1328Q86T90 577 aa16.92■□□□□ 0.3
VPS36-207ENST00000611132 DTNBO60941 627 aa16.91■□□□□ 0.3
VPS36-207ENST00000611132 VPS37DQ86XT2 251 aa16.91■□□□□ 0.3
VPS36-207ENST00000611132 CNNM1Q9NRU3 951 aa16.91■□□□□ 0.3
VPS36-207ENST00000611132 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms