RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 GOLIM4O00461 696 aa12.19□□□□□ -0.46
CTCFL-216ENST00000608263 SGSM2O43147 1006 aa12.19□□□□□ -0.46
CTCFL-216ENST00000608263 TTLL5Q6EMB2 1281 aa12.19□□□□□ -0.46
CTCFL-216ENST00000608263 CPLX2Q6PUV4 134 aaKnown RBP12.19□□□□□ -0.46
CTCFL-216ENST00000608263 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
CTCFL-216ENST00000608263 SCAND2PQ9GZW5 306 aaPredicted RBP12.19□□□□□ -0.46
CTCFL-216ENST00000608263 A0A0U1RQG5 324 aaPredicted RBP12.19□□□□□ -0.46
CTCFL-216ENST00000608263 POLR3DP05423 398 aaPredicted RBP12.19□□□□□ -0.46
CTCFL-216ENST00000608263 TPM3P06753 285 aa12.19□□□□□ -0.46
CTCFL-216ENST00000608263 RASSF8Q8NHQ8 419 aa12.19□□□□□ -0.46
CTCFL-216ENST00000608263 ZBTB9Q96C00 473 aa12.19□□□□□ -0.46
CTCFL-216ENST00000608263 METP08581 1390 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 DYNC1I1O14576 645 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 TRIM29Q14134 588 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 PODXL2Q9NZ53 605 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 PLXNC1O60486 1568 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 MCM5P33992 734 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 PTH1RQ03431 593 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 CREB3L3Q68CJ9 461 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 CCDC82Q8N4S0 544 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 HOXC9P31274 260 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 CCDC129Q6ZRS4 1044 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 COPS6Q7L5N1 327 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 ZCRB1Q8TBF4 217 aaKnown RBP12.18□□□□□ -0.46
CTCFL-216ENST00000608263 ZDHHC9Q9Y397 364 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 FLT4P35916 1363 aa12.18□□□□□ -0.46
CTCFL-216ENST00000608263 KIF1BO60333 1816 aa12.17□□□□□ -0.46
CTCFL-216ENST00000608263 ABCA6Q8N139 1617 aa12.17□□□□□ -0.46
CTCFL-216ENST00000608263 DDB1Q16531 1140 aa12.17□□□□□ -0.46
CTCFL-216ENST00000608263 CFAP45Q9UL16 551 aa12.17□□□□□ -0.46
CTCFL-216ENST00000608263 PRR36Q9H6K5 1346 aa12.17□□□□□ -0.46
CTCFL-216ENST00000608263 LARP1Q6PKG0 1096 aaKnown RBP12.17□□□□□ -0.46
CTCFL-216ENST00000608263 TMEM2Q9UHN6 1383 aa12.17□□□□□ -0.46
CTCFL-216ENST00000608263 MNS1Q8NEH6 495 aa12.17□□□□□ -0.46
CTCFL-216ENST00000608263 XAGE3Q8WTP9 111 aa12.17□□□□□ -0.46
CTCFL-216ENST00000608263 ERCC4Q92889 916 aaPredicted RBP12.17□□□□□ -0.46
CTCFL-216ENST00000608263 NEK1Q96PY6 1258 aa12.17□□□□□ -0.46
CTCFL-216ENST00000608263 TRIM34Q9BYJ4 488 aa12.17□□□□□ -0.46
CTCFL-216ENST00000608263 TYRO3Q06418 890 aa12.16□□□□□ -0.46
CTCFL-216ENST00000608263 ADCK5Q3MIX3 580 aa12.16□□□□□ -0.46
CTCFL-216ENST00000608263 ZNF396Q96N95 335 aaPredicted RBP12.16□□□□□ -0.46
CTCFL-216ENST00000608263 NAT10Q9H0A0 1025 aaKnown RBP12.16□□□□□ -0.46
CTCFL-216ENST00000608263 TMX1Q9H3N1 280 aa12.16□□□□□ -0.46
CTCFL-216ENST00000608263 GRM8O00222 908 aa12.16□□□□□ -0.46
CTCFL-216ENST00000608263 ZPR1O75312 459 aa12.16□□□□□ -0.46
CTCFL-216ENST00000608263 HSPA4P34932 840 aa12.16□□□□□ -0.46
CTCFL-216ENST00000608263 BRPF1P55201 1214 aaPredicted RBP12.16□□□□□ -0.46
CTCFL-216ENST00000608263 HSP90AA4PQ58FG1 418 aa12.16□□□□□ -0.46
CTCFL-216ENST00000608263 FSIP1Q8NA03 581 aa12.16□□□□□ -0.46
CTCFL-216ENST00000608263 BICC1Q9H694 974 aaKnown RBP12.16□□□□□ -0.46
CTCFL-216ENST00000608263 SERPINC1P01008 464 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 HS1BP3Q53T59 392 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 HSP90AB3PQ58FF7 597 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 TTC39AQ5SRH9 613 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 SPHKAPQ2M3C7 1700 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 UVSSAQ2YD98 709 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 Q6ZUG5 572 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 RUFY3Q7L099 469 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 TRMT112Q9UI30 125 aaKnown RBP12.15□□□□□ -0.46
CTCFL-216ENST00000608263 FAM135BQ49AJ0 1406 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 RAD50Q92878 1312 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 KRT32Q14532 448 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 CDC37L1Q7L3B6 337 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 CCDC144CPQ8IYA2 1237 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 CEP57L1Q8IYX8 460 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 FAM200AQ8TCP9 573 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 NEO1Q92859 1461 aa12.15□□□□□ -0.46
CTCFL-216ENST00000608263 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.47
CTCFL-216ENST00000608263 CCAR1Q8IX12 1150 aaKnown RBP12.15□□□□□ -0.47
CTCFL-216ENST00000608263 CEP126Q9P2H0 1117 aa12.15□□□□□ -0.47
CTCFL-216ENST00000608263 TET3O43151 1660 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 ERICH4A6NGS2 130 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 KSR2Q6VAB6 950 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 JAK2O60674 1132 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 LARGE1O95461 756 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 IFIT1P09914 478 aaKnown RBP12.14□□□□□ -0.47
CTCFL-216ENST00000608263 PTPN14Q15678 1187 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 ME3Q16798 604 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 CCDC171Q6TFL3 1326 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 ZNF335Q9H4Z2 1342 aaPredicted RBP12.14□□□□□ -0.47
CTCFL-216ENST00000608263 IDH1O75874 414 aaKnown RBP12.14□□□□□ -0.47
CTCFL-216ENST00000608263 AKAP17AQ02040 695 aaKnown RBP12.14□□□□□ -0.47
CTCFL-216ENST00000608263 NBPF6Q5VWK0 638 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 NBPF4Q96M43 638 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 TBC1D2BQ9UPU7 963 aa12.14□□□□□ -0.47
CTCFL-216ENST00000608263 TTC21AQ8NDW8 1320 aa12.13□□□□□ -0.47
CTCFL-216ENST00000608263 MAP3K5Q99683 1374 aa12.13□□□□□ -0.47
CTCFL-216ENST00000608263 MARCH6O60337 910 aa12.13□□□□□ -0.47
CTCFL-216ENST00000608263 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
CTCFL-216ENST00000608263 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
CTCFL-216ENST00000608263 LIG1P18858 919 aa12.13□□□□□ -0.47
CTCFL-216ENST00000608263 LRRFIP1Q32MZ4 808 aaKnown RBP12.13□□□□□ -0.47
CTCFL-216ENST00000608263 CCDC158Q5M9N0 1113 aa12.13□□□□□ -0.47
CTCFL-216ENST00000608263 DDX19AQ9NUU7 478 aaKnown RBP12.13□□□□□ -0.47
CTCFL-216ENST00000608263 A0A087WWV3 80 aa12.13□□□□□ -0.47
CTCFL-216ENST00000608263 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
CTCFL-216ENST00000608263 APOBRQ0VD83 1088 aa12.12□□□□□ -0.47
CTCFL-216ENST00000608263 LMBR1LQ6UX01 489 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms