RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	CEP128	Q6ZU80	1094 aa		4.71	□□□□□ -1.66
KCNMA1-223	ENST00000604624	DIAPH1	O60610	1272 aa	Known RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	VPS36	Q86VN1	386 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	JADE2	Q9NQC1	790 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	KIF7	Q2M1P5	1343 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	MST1R	Q04912	1400 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SLC3A2	P08195	630 aa	Known RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	MCM3	P25205	808 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	RUFY3	Q7L099	469 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CEP112	Q8N8E3	955 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	MYO5C	Q9NQX4	1742 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CCER2	I3L3R5	266 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SKOR1	P84550	965 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	IL27	Q8NEV9	243 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	DACH1	Q9UI36	760 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	NOP2	P46087	812 aa	Known RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	FKBP15	Q5T1M5	1219 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	FERMT2	Q96AC1	680 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	MRPL46	Q9H2W6	279 aa	Known RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	HDGF	P51858	240 aa	Known RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	BMP2K	Q9NSY1	1161 aa	Predicted RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TACC3	Q9Y6A5	838 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CDC42BPB	Q9Y5S2	1711 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	KIF5B	P33176	963 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CALCOCO2	Q13137	446 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	STK3	Q13188	491 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	NGDN	Q8NEJ9	315 aa	Known RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	VCX3B	Q9H321	246 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PUF60	Q9UHX1	559 aa	Known RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ARID1A	O14497	2285 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	LIG1	P18858	919 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PDE4A	P27815	886 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CFAP157	Q5JU67	520 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	INTS3	Q68E01	1043 aa	Known RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	JMY	Q8N9B5	988 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	RSRC1	Q96IZ7	334 aa	Known RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TEF	Q10587	303 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	HAUS7	Q99871	368 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ABCA6	Q8N139	1617 aa		4.7	□□□□□ -1.66
KCNMA1-223	ENST00000604624	KANK1	Q14678	1352 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SH2D4B	Q5SQS7	431 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	KLHL10	Q6JEL2	608 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ICE1	Q9Y2F5	2266 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TACC1	O75410	805 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PSMA5	P28066	241 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	COG7	P83436	770 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PPP4R3A	Q6IN85	833 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CEP57L1	Q8IYX8	460 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	NUP88	Q99567	741 aa	Predicted RBP	4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	DDX41	Q9UJV9	622 aa	Known RBP	4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	URB1	O60287	2271 aa	Known RBP	4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	MYO9B	Q13459	2157 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	USP5	P45974	858 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CUL4B	Q13620	913 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TDRD12	Q587J7	1177 aa	Known RBP	4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	MICALL1	Q8N3F8	863 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TRAK2	O60296	914 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	MVP	Q14764	893 aa	Known RBP	4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SYNC	Q9H7C4	482 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	RSPH14	Q9UHP6	348 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	LRRC7	Q96NW7	1537 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SLC4A1	P02730	911 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ZNF318	Q5VUA4	2279 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ZBTB17	Q13105	803 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PSPC1	Q8WXF1	523 aa	Known RBP	4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	BICD1	Q96G01	975 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	KIDINS220	Q9ULH0	1771 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	FAM177B	A6PVY3	158 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	DNAJC21	Q5F1R6	531 aa	Known RBP	4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ZNF396	Q96N95	335 aa	Predicted RBP	4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CACNA1F	O60840	1977 aa		4.69	□□□□□ -1.66
KCNMA1-223	ENST00000604624	MAP4K4	O95819	1239 aa	Predicted RBP	4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PDC	P20941	246 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PRPH	P41219	470 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	DHX8	Q14562	1220 aa	Known RBP	4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	HSP90AA5P	Q58FG0	334 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	GBP6	Q6ZN66	633 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	C16orf45	Q96MC5	204 aa	Predicted RBP	4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PPRC1	Q5VV67	1664 aa	Known RBP	4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	KNL1	Q8NG31	2342 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	FAM135B	Q49AJ0	1406 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	IRX5	P78411	483 aa	Predicted RBP	4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TSHZ2	Q9NRE2	1034 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TXNDC16	Q9P2K2	825 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SCAF11	Q99590	1463 aa	Known RBP	4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	CRCP	O75575	148 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	AIMP1	Q12904	312 aa	Known RBP	4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PTPN14	Q15678	1187 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	UTP14C	Q5TAP6	766 aa	Known RBP	4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	TRIM22	Q8IYM9	498 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ACRBP	Q8NEB7	543 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	DNAJC5	Q9H3Z4	198 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	SATB2	Q9UPW6	733 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	ZNF652	Q9Y2D9	606 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	KIAA1210	Q9ULL0	1709 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	PCK1	P35558	622 aa		4.68	□□□□□ -1.66
KCNMA1-223	ENST00000604624	FKBP5	Q13451	457 aa	Predicted RBP	4.68	□□□□□ -1.66

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